Linepithema humile (Argentine ant): 105674764
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Entry
105674764 CDS
T04898
Name
(RefSeq) transcription factor SOX-9-like isoform X1
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lhu03000
]
105674764
Transcription factors [BR:
lhu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105674764
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Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox_N
HMG_WDHD1
ZER1-like_2nd
Motif
Other DBs
NCBI-GeneID:
105674764
NCBI-ProteinID:
XP_012226749
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All DBs
Position
6:17722540..17736661
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AA seq
431 aa
AA seq
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MKMNDVKPESSSASISPAGGNNNNNNNNNNINGSGKASATAAAAAAVTANGGEGISAAVA
KVLQGYDWTLVPVATKGSGDKRAAHVKRPMNAFMVWAQAARRKLADQYPQLHNAELSKTL
GKLWRLLSENDKKPFIEEADRLRVIHKREHPDYKYQPRRRKQNGPSSGRENSPSRNQSNV
TFSVSRSLKQEDMSPRGVQGPNSPQSGVSSSPPTTPSQGLSPPTPPTTPRGQHYVNQNNQ
LPQNNTVYYQELVSGTSSSESPHQQPPVDLRYIEVGDGLAGEENQLNGLGTLGGLGLNLP
VNFQECEVESNELDQYLPPQSAPIHQYPPVQVTTASQWLLNRYEEEIERPIKRHCSEQAM
AEVSSWEDRTQEMVRYHELQPPLPPVQYISAHNAHHSHATTQMSHPHVSTPYAQYAHRYV
PGIETSWPNYM
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaacgacgtcaagccggagagctccagcgcgtccatttcgccagcaggtgga
aataacaacaataataacaacaataacaacatcaacggcagcggcaaagcatcggcaacg
gccgccgccgcggcggcggtcaccgcgaacggtggcgaggggatcagcgcagccgtcgcc
aaggttctccagggatacgactggactctggtgccggttgccaccaagggctccggcgac
aaaagggcggcccacgtcaaaaggcccatgaacgcgtttatggtgtgggctcaggctgca
aggcgaaaactagccgatcaatatcctcagcttcacaacgccgagctgtcgaaaacactg
ggaaagttatggcgactcctgtccgaaaacgacaagaaaccctttatcgaagaggccgat
cgcctgcgcgttattcacaagcgcgagcatcccgattacaagtaccaaccccgacgccgg
aagcagaacgggccgtcttccggccgcgaaaattcaccctcgaggaaccagagcaacgtg
acgttcagcgtttccaggtccttgaaacaggaagacatgagtcctcgaggtgttcaagga
cccaattcaccgcaaagtggtgtgagctcttcgccacccacgacacccagtcagggtctg
tcaccgccgacaccccccacgacacccagaggacagcactacgttaatcagaacaatcag
cttccgcagaataacaccgtgtactatcaagagctggtcagcggtacgtcgtcgagcgaa
tccccgcatcagcaaccaccggtcgatctccggtacattgaagtcggagacggcctggcc
ggcgaggagaaccagttgaatggcctcggcactttgggcgggctcggcctgaatctcccg
gtgaatttccaggagtgcgaggtcgagagcaacgagctcgaccaatatctaccaccccag
agcgctccgatacatcagtatccacctgtgcaagtcaccaccgcctcgcaatggttactc
aacagatacgaagaggagatcgaaaggccgatcaaacgtcactgttccgagcaagcgatg
gcggaggtatcgtcttgggaggacaggactcaggaaatggtcaggtaccacgagttgcag
cctccccttccgccggtccagtacatatccgcccataacgcgcatcattcgcacgcgact
acgcagatgagccatccgcatgtatctacgccctacgcgcaatacgcgcatcgctatgta
cctggcatcgagacatcgtggccgaattacatgtag
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