Linepithema humile (Argentine ant): 105675144
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Entry
105675144 CDS
T04898
Symbol
Vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105675144 (Vps50)
Membrane trafficking [BR:
lhu04131
]
Protein recycling
Others
EARP complex
105675144 (Vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Utp13
Bcr-Abl_Oligo
Motif
Other DBs
NCBI-GeneID:
105675144
NCBI-ProteinID:
XP_012227471
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Position
5:24263420..24269268
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AA seq
941 aa
AA seq
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MQSDIMEDLKFKFFGLINKQNATKIPLMGLNPDLLNPPDPQKHEDLRSEADQSTESEPIP
DQDILDSIEDIYFDTTDSKFNPIRYELEKLPTILHPKELEKCYKKLKQQHKAVSKKVFKL
IVENQSACEVEFDKILLLQEQLQDALEICKMGRADLTLAKKQFTTASLGILANYQRRQVI
EELLNSLNTIKTLQRTGDRLQELLKEGNYPGAISLLLECQRAAQTYKHFHCIAALNGKLQ
EILEQVEDALDSTLSTMCTQFDVTVYSSVQEAYMLLGKTQSAMDQLHMHFTTAIQSTALT
VIHSYAGGDMKRQYKQVCQDVPHDKYIVCLTELCKSLWTILISCYLIVNWHNAQEDKLEC
KSDVKDLEATFNKQYVKQKLEHTKVRVWQDVETKISIYLMNANLTYIKFEQFVQILSIVN
RLMEIGEELCGFKSENLQESIRKQSLSYFSNYHASRLDELRIFLENDGWELCPVKSNFMA
TQLLEFRSLKPSLNNCKMWNSLDSSNLSDSDNSTGIDLQKYLEGGSSPFTIGLDDTMDED
ILIHDDIDQPAYFSDESDDDIPDELKHDYVDESDHTKVNKKKCKLKQSGPMVTNTTLSIL
RVCGKYLQMSRLLRSIAITVIQSMIQFFELCFYTVHLFFTSDLQINSDSLYSPKLKLSLT
RIRENLIISENDTMEENGNANYEKVRQPQLSSIVNLSQPEKLHGLTERIVAVESLIFLGQ
QYEGLKPYLEHLIANSPQRGFLHQFYMQTVASTADLRKPVYMAVASQAFDVANILNLMSK
VNWEVTDVMSQHSNYIDTLIQEVCTLNERLNTIGTYIPLSVDVCNAVWENVAHLITHTLV
EGFSYAKKCSNGGRALMQLDFTQLRSKFEKVTLLRPMPHREYAESYIKAYYFPENSFEEW
IKEHKEYSVKHLVGLISATCQNNKKTRQRLIALVEEQRPSR
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgacatcatggaagatttgaagtttaagtttttcggcctcattaacaagcag
aatgcaactaaaataccgcttatgggtttaaatcccgatttgcttaatccacctgaccca
caaaaacatgaagatcttcgttcagaggctgatcagtcaacagagagcgagcctatacca
gatcaagatatattagattctattgaagatatttactttgatactactgatagtaaattt
aatccaatacgttatgaattagagaaattaccaacaatattgcatcctaaagaacttgag
aaatgttacaaaaaactcaagcaacaacataaagcagtctctaagaaagtattcaagctt
attgtagaaaaccagagtgcctgtgaagtagaattcgacaagattctgctgctgcaggaa
caattgcaagatgctctagaaatatgtaaaatgggaagagcagatttaacattagccaaa
aaacagtttacaacagccagcttaggcatattagctaattatcagagacgacaagtaatt
gaggaactattaaacagtctaaatactataaagacgctgcaacgtacgggagatcgtcta
caagagttactaaaagaaggaaattatcctggagccatatcgcttcttttggaatgccaa
agagcagctcaaacttataagcatttccattgtatcgctgcattgaatgggaaattacaa
gagattttagaacaagtggaagatgccttagacagtacactctctactatgtgtactcaa
ttcgatgtgacagtatactcttctgttcaagaggcatatatgttactagggaagactcaa
tccgccatggatcaattgcatatgcattttaccactgccattcagagcactgcgttgact
gtcattcactcttatgcaggaggcgacatgaaaagacaatataaacaagtgtgtcaggat
gttccccatgataaatacatagtttgtctaacagagctgtgcaaatcattgtggacaata
ttgatatcgtgttatctaattgtaaattggcacaatgcgcaagaggacaaattggagtgt
aaatccgacgttaaggatttggaggcgacattcaataagcaatatgttaagcaaaaatta
gagcataccaaagttcgcgtgtggcaggatgtggaaacaaagatatcaatatatctgatg
aatgctaatttgacatacatcaagtttgaacagtttgttcagatattgagtatagttaat
agattgatggaaattggggaagagctttgtggtttcaaatctgagaatttacaggaatcc
attagaaagcagtccttatcctatttctctaattatcacgcatctcgcttggatgagctg
agaatattcctggaaaatgacggttgggaattgtgccctgtaaagtccaatttcatggct
acccagttattagagtttcgtagtttgaaaccttcacttaacaactgtaaaatgtggaac
agtttagacagctcaaacttaagcgacagcgacaattctacgggcatcgatttgcagaaa
tatttagagggcggctcgtcaccgttcacgataggattggacgatactatggatgaagat
atcttaatacacgatgatattgatcaacccgcatacttttcggacgagtctgatgatgat
attcccgatgaactgaagcacgattacgtcgatgagtcggaccatacgaaagttaataaa
aagaagtgcaaactcaaacaatccggacctatggtcacgaacacgacgttaagcatactg
agagtgtgcggcaagtacctacagatgtccaggcttttacgatcgatcgcgattactgtc
atacagagcatgatacaatttttcgaactatgcttctacacagtacatttattctttaca
tcggatctccaaatcaacagcgattcattatacagcccgaaattaaagttatctttaacg
cgaatcagagaaaatctcattatctctgagaacgatacaatggaagaaaatggcaatgca
aattacgaaaaagtaagacaaccacagctttcatccattgtgaatttgtcgcagcctgag
aaacttcacggattaacggaacgtattgtagctgtcgagtctctaatatttttaggacaa
caatacgaaggcctaaagccttacttagagcatcttattgccaacagtcctcaaagagga
tttttgcatcagttttatatgcaaacagtagcgtccactgcagatttgagaaaaccagtt
tacatggcggtagcatcgcaagcatttgacgttgcgaacatcttaaatttaatgagcaaa
gtaaattgggaagtgacggacgtcatgtctcaacactctaattacatcgacacgctaatt
caagaggtatgcactttgaacgaaagacttaacaccattggaacatatattcctttaagc
gtggatgtttgtaatgcagtatgggaaaacgtggctcacttaatcacacacactttagtg
gaaggattctcctatgccaaaaagtgctcgaatggtggtagagctctgatgcaactcgat
ttcacacagctgagatcaaagttcgagaaggtgacattgttgagacctatgccgcataga
gagtatgccgagtcatatattaaagcttactattttcctgagaatagttttgaagaatgg
atcaaagagcacaaggaatattcagttaaacatttagtcggattaatttcggctacgtgt
caaaataataagaaaactcgacagcgattaatagcgcttgtggaagagcaacgacccagc
agatag
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