KEGG   Linepithema humile (Argentine ant): 105675450
Entry
105675450         CDS       T04898                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105675450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lhu03041]
    105675450
   03036 Chromosome and associated proteins [BR:lhu03036]
    105675450
Spliceosome [BR:lhu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105675450
 Complex B
    105675450
 Complex C
   U2 SnRNP specific factors
    105675450
Chromosome and associated proteins [BR:lhu03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    105675450
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 105675450
NCBI-ProteinID: XP_012228050
LinkDB
Position
5:2111477..2121676
AA seq 1302 aa
MDSIPRTHKDIEAQIREIQSKKKELLNTASEKDQVALGKTGFYDQDIYDSSNNKFDGYVT
SIATNDEIEDYDPFADKRPTIADREEKDYDPFADRRRPTIADREDEYRQKRRRMIISPER
VDPFAEGGKTPDVGSRTYTEIMREQMLKGEETELRKRLAEKAKDGTLKANGEPKPAPKKK
GRWDQTDDTPIQKKLSGTSATPTSWDNADVTPAVIRWDETPGHGKGAETPGATPGVSTRM
WDATPAHATPGAVTPGRETPSHEKTVTSRRNRWDETPKTERETPGHNSGWAETPRTDRVA
GDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLTTPHQTTILTPSAVTPTGPK
AMGLATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDDELDALFPPGYKILQPPAGYIP
IRTPARKLTATPTPIAGTPQGFFIQTEDKSAKYVDNQPKGNLPFMKPEDAQYFDKLLVDV
DEETLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSP
TLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAK
AAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARH
TGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALAIAALAEAATPYGIE
SFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDE
EMKKIVLKVVKQCCATDGVEAQYIKDEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIAN
KVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSRLEEQLIDGILYAFQE
QTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVM
KTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTP
ILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFG
YIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELN
VQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTACAAIKHMALGVYGF
GCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQYTLQGLFHPARKVR
DVYWKIYNSLYIGGQDALVAGYPRIMNDPKNQYIRYELDYVL
NT seq 3909 nt   +upstreamnt  +downstreamnt
atggactccattccgagaacgcataaggacattgaagctcagataagagaaatacagtca
aaaaagaaggagcttctgaacacagcatctgagaaagatcaagttgctttgggaaaaact
ggtttctatgatcaagatatttatgatagcagtaataataaatttgatggctacgttaca
tcgattgcaaccaacgatgagattgaggattatgatccgtttgcggacaaacgacccacc
atagctgatcgagaggagaaagattatgatccatttgccgacagacgacggcctaccata
gctgacagggaagatgagtaccgacagaaaagacggagaatgattatctctcctgaacgt
gtcgatccctttgctgagggtggcaagactcctgacgtcggttctagaacatataccgag
attatgagagaacaaatgctcaaaggtgaagagacagagctgagaaaaagattagcagaa
aaggctaaggatggtactctgaaagctaacggcgaacccaaaccagctcctaaaaagaaa
ggtcgttgggaccaaacggatgatactcccatacagaaaaaattatctggaacttcagca
acacccacatcctgggataacgcagatgtaacgccagctgttattagatgggatgaaact
ccaggtcatggtaaaggggcagaaacccccggagctacaccgggagtgagtacgagaatg
tgggacgccacaccagcacacgcaacaccgggagccgtgactccaggaagggaaacgcct
tcgcatgaaaagactgtgacgagtcgaagaaatcgttgggatgaaactccgaagactgag
cgagaaactcctggacataacagcggttgggcagagactccaagaaccgatcgcgtcgcc
ggagatttgatacaagaaactccgacaccgtcagcgagtaagcgacgaagtcgatgggac
gagacaccgtcgaatcaaacgccgggctcgatgacgccgcagactccggcgacgcctctc
acgacgcctcatcagacgacgatattgactccgagtgccgtcacaccgacgggacccaaa
gcgatgggtctggctactccgacaccaggacatttgatgtctatgacacccgaacaactg
caggcttatcgttgggagcgcgagatagacgaacgaaatagacctttgtcagacgatgag
ttggatgcgctgtttcctcccggatacaagatcctacagccaccagcaggatacatacct
attcgcacacctgctaggaagctcactgcaacacccacacccatcgcgggcacgcctcaa
ggtttcttcattcaaacggaggataaaagcgccaagtatgtcgacaatcaaccaaagggc
aatttgccatttatgaaaccagaagacgcgcagtatttcgataaactgttagttgacgtg
gacgaagaaacgttgagtcctgaagaacagaaagaaagaaaaattatgaaattgctttta
aaaataaaaaacggaacaccgccaatgcgtaaagctgctttgagacaaataacggacaaa
gcaagagaatttggtgctggaccgctcttcaaccagatccttccgcttcttatgtcacct
actcttgaagatcaagaacgtcatctgctagtcaaagttatcgatcgcattctttataag
ttggacgatttagtacgaccgtatgtgcacaagattcttgtcgtcatcgaacctctattg
atcgatgaggattactatgctcgtgtcgaaggtagagagattatttcaaatttggcaaag
gctgcgggtttagccacaatgatctctacaatgagaccagatatcgataatattgacgaa
tacgtacgcaataccacagcaagagcattcgctgtcgtcgcatccgctcttggaattcct
tcccttctccctttcttaaaagctgtttgccgcagtaagaaatcgtggcaagcgcgacac
actggtatcaaaatcgtgcaacaaatagctattttaatgggctgtgccattctgccacat
ctgaaaagtttggtagagatcatagaacatggtttagtcgatgagcagcagaaagtacga
acaattaccgcattagccattgctgcactggctgaagcagcaacaccatacggtatcgaa
agcttcgactcggtgctaaaaccgctttggaaaggtatccgcacgcacagaggaaaaggt
ttagcagcattcttaaaagctatcggctatctcatcccattgatggacgcagagtacgcg
aattattataccagggaagtaatgctaatccttatacgtgaattccagtcgcccgatgaa
gaaatgaaaaagattgtgttgaaggtagtcaaacagtgttgtgcaacggatggtgtggaa
gctcagtatataaaggatgaaattctgcctcacttcttcaaacatttctggaatcatcgc
atggcattagatcgtagaaattacagacagcttgtagacacgacggtagaaatagccaac
aaagtgggtgcatcagaaattattaacagagtagtggatgatctaaaggatgaaaatgaa
caatatagaaagatggttatggaaaccatcgagaagataatgggcaatttaggagcagca
gatgtcgattctcgtctagaggagcagctcattgatggaattctatatgccttccaggag
caaacaaccgaggacgtagttatgttgaatggttttggtacgattgtgaacacattaggt
aaaagagtaaaggcatatcttcctcaaatatgtggtacaatattgtggaggttgaataac
aaatcggcaaaagtaagacagcaagctgcagatcttatttcgcgtatcgcagtggtcatg
aagacttgtcaagaggaaaaattaatgggacacttgggagtcgtgttgtacgagtattta
ggtgaagaatatccagaagtattaggtagtattttaggggcattgaaagccattgttaat
gtcataggaatgacgaaaatgacaccacctatcaaagatttattaccaagacttactcct
atcttgaagaacagacatgaaaaggtgcaagaaaattgcattgacctcgtgggcagaatc
gctgatcgtggtcccgaatatgtttccgcacgagaatggatgaggatatgtttcgaattg
ttagaattattgaaagcccacaaaaaggctattagaagagcgacagtaaatacttttggt
tatatcgccaaagctattggaccgcacgatgtgttagcgacacttttgaataatttgaaa
gtccaggaacgtcagaatcgcgtttgcacaacagtggctattgccatcgttgctgaaacg
tgtagcccttttacagtattacctgcattgatgaacgaatacagagtacctgagttaaac
gtacagaatggagtattgaaatccttgtcattcttattcgagtatatcggtgaaatgggt
aaagattatatttacgctgtgagtccattgctagaagatgcacttatggacagggactta
gtacacagacagacggcctgtgctgctatcaaacacatggcattaggcgtttatggattt
ggatgcgaagatgcgttgatacatttattgaatcatgtgtggccgaatgttttcgaaact
tcaccacatttggtccaagcatttatggatgctgtggatggattgcgcgttgcgcttgga
cctatcaagattttacagtatacactacaaggtttatttcatccagcccgtaaagttcgc
gacgtctactggaagatatacaattctctttacattggtggacaggatgctcttgtagct
ggttaccctcgtattatgaatgatccaaagaaccaatatataagatatgaactggattat
gtactgtaa

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