Linepithema humile (Argentine ant): 105675534
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Entry
105675534 CDS
T04898
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhu03009
]
105675534
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105675534
Ribosome biogenesis [BR:
lhu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105675534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
RNase_PH_C
Gp7_5th
Motif
Other DBs
NCBI-GeneID:
105675534
NCBI-ProteinID:
XP_012228216
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MKTQKWEELDVRLSDPVLKTLKQLKYFNMTPVQAACIPLLLNGKDVAAEAVTGSGKTLAF
LIPLLEILQRRSEKWKTMEIGAIIISPTRELASQISKILDTFLENIPSLKQVLLVGGGPR
ERDVEKLKRGVNIIVSTPGRLEDIFSNCSSINLGFCVKSLEFLVLDEADRLLDFGFSGTL
DIILSYLPRLRRTGLFSATQTKKLRELIRAGLRNPALIIVKEKSNVSTPINLNNSYTIAQ
PDNKLSVLINFIRLVGFEMKYMIFFSTCACVDYFSRVIKILLPSINIFALHGKMKNERYK
VFEPFRRAQSGILICTDVMARGIDIPEVDWVLQYDPPSTASSFVHRCGRTARIGNEGNAL
LFLLETEDAYVDFIKRNQKVELQKTETKLDEDTVKECLQQMRQLQLKDRLIFDIANRAFV
SYIQAYNKHECNLILRLKDIDLGKLAMGFGLLKMPKMPELKGKDVSFFVGPDIDVNTISY
VNQQRELRRMEKLTKYQNTGVWPVNLKRKQKQTESWSESKKRKLEKQEKRGKRKEKRKLK
QQFTTTVSVKKKKKRISEEDFEELAKDIALIKKFKKKKISQEVFDAAFGV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacaaaaatgggaagaattagatgtgcggttaagtgatcctgttttaaaaaca
cttaaacagttgaaatatttcaatatgacaccagttcaggcagcttgtataccattatta
ttaaatggtaaagatgttgcagcagaagcagtcacaggtagcggaaagacacttgctttt
ctcattccattgttggaaatattacagaggcggtcagaaaaatggaagactatggaaata
ggagcgataataattagtccaacaagagaactagcttcacagattagcaaaattttggat
acattcttggaaaatattccatcattgaagcaagtattgctggttggaggaggaccacgt
gaaagagatgtggagaaattgaagagaggagtaaatattattgtctctacacctggtaga
ttggaagacatcttctcaaattgtagttctataaatttaggtttttgtgtaaaatctttg
gagtttcttgtattagacgaagcagatagattattagacttcggtttttctggaacttta
gacatcattttgagctatttgccgcgtcttagaaggacaggactattttctgcaacacag
acaaaaaaactgcgggaattgattcgagcaggattgagaaatccagcactgatcattgta
aaagagaagtctaacgtctcgacgcctataaatttgaacaatagctacacaatcgctcag
cctgacaataagttatcagtattgataaattttatacgtttagtgggatttgaaatgaaa
tatatgatatttttttctacatgtgcgtgtgtggattacttcagtcgagttataaaaata
ttattgccgtctataaacatatttgccttacatggtaaaatgaagaacgaaagatataaa
gtgtttgagccatttcgacgtgcccaaagtggtattttaatctgtacagacgtaatggct
cgtggaatcgatataccagaggtagactgggtgttacaatatgaccctccttccaccgcc
agtagttttgtccatagatgcggtagaaccgcgcggattggaaatgaaggaaatgcattg
ttatttcttttagaaacagaagatgcatatgtagactttattaaaagaaatcagaaggta
gaattgcaaaaaacagaaacaaaactggacgaggacaccgtgaaagaatgtttgcagcaa
atgaggcagctgcagctaaaggaccgacttatattcgacatagcaaatcgcgcatttgtt
tcatacatacaagcatataacaaacacgaatgtaatttaattcttcgattaaaagacatt
gatttgggaaagctggcaatgggctttgggttgttgaaaatgccaaaaatgcctgagctc
aaaggaaaggacgtgtcgttcttcgtcggccctgacattgatgtgaacacgatatcttac
gtaaaccagcaacgcgagctgcgtagaatggaaaaattgacgaaatatcaaaacaccggc
gtttggccggttaatctgaaacgtaaacagaagcaaaccgaatcctggtcggaaagcaaa
aaaagaaaacttgagaagcaggagaaacgaggtaaacggaaggaaaagaggaaattaaag
caacagtttacaacaacagtttcggttaaaaagaagaagaaacgaataagcgaggaagat
tttgaggaattagcaaaagatatagctttaattaaaaaatttaagaaaaaaaagatttca
caagaggtatttgacgcagcttttggagtctaa
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