Linepithema humile (Argentine ant): 105675608
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Entry
105675608 CDS
T04898
Name
(RefSeq) DDB1- and CUL4-associated factor 10 homolog
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lhu04121
]
105675608
Ubiquitin system [BR:
lhu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105675608
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
105675608
NCBI-ProteinID:
XP_012228305
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Position
5:complement(682127..688152)
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AA seq
695 aa
AA seq
DB search
MPKIRIKQTPNSLWLRQRELGVKFPLGHNDDFHKTLYSSIQPITSWDHGDNLTAARHGGV
FNLEYSPDGSLLLAACEKKSILMFDPLCRKLIHAIDNAHNDCVNCVRFLDQRMFATCSDD
STVALWDARNLKQRIRTLQGHSNWVKNIEYSPSDSLLLTSGFDGSIYTWDINSFTENSFV
YTRVFHTNGLMRTRLTPDTSKMLICTTSGYLIVIHNLKLSTLSQDLAGFKPNMYRLMQLS
QTTIPVAASFTHLFAQNRTHNRVEFLTDFPIGDDAEVISSLQVHPQGWCALSRNVSSGEK
SEWTCIHDIQERETSSNVEHVNEGEEGRLTSLNMEEFEDFPQSQPSSSGITSSLVIESSN
RTRIVHDVSDMRSNSFEPPIHVSADAAPSSVRSSRTNWQVRTLRSQSRNPRADRNSVRTN
FDMLEVNSGTSSAADSRVNTIHNDDRSENRHVNDNNDSTHDASADDRDRENAREYRTPRL
QSQLNDLRRRNVIDNFSTGNVELHVSSSDVWEALVAIREARNRREREREFYPGAERRDWL
PRSNNGVSVNIPRSSHTVVIIGDRTRVQSLPNRQSQKPMYAIPRNHKIHQNTPRLTHYIE
EPNVGSGYIKELCFSADGRLICSPFGYGVRLLAFSNNCAELSNCVPPANESVQLHELATH
IGHSDIVVSTKFSPKHYLLVSGCLSGKIVWHQPVV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagatacggatcaagcaaacgccaaacagcctttggttgaggcaacgcgagttg
ggtgtaaagtttccgttgggccacaacgatgactttcacaagactctttactcttctata
cagcctattacttcgtgggatcatggggataatttaaccgctgcgagacacggcggtgta
tttaatttggagtattcgccagatgggtctctcttgctggcagcatgtgagaagaaaagt
attttaatgtttgacccattatgtagaaaattaatacatgccattgacaatgctcataat
gattgcgtcaattgcgtaagattcctggatcaacgtatgtttgctacatgttctgatgac
agtacggttgctttatgggatgccaggaatttaaaacaaaggataaggactcttcaggga
cactctaattgggttaaaaacatagaatatagtccaagtgatagtctgttattaactagt
ggatttgatggtagcatatatacttgggatattaatagctttacagagaatagttttgtg
tatacgcgtgtatttcacacaaatggattaatgcgaacaagacttactcccgatactagc
aaaatgttaatatgcactacgtcgggatatctcattgtaatacacaatcttaagcttagt
acactaagtcaggatttggctggattcaagccaaatatgtacagattaatgcaattatct
caaactactataccagttgccgcaagtttcacgcatctttttgctcaaaatcgtactcac
aacagagttgagttcctcaccgactttcctataggcgacgatgctgaggtaatatccagt
ttacaagttcatccacagggatggtgcgccttatcgagaaatgtcagtagcggtgaaaaa
tcagagtggacctgcattcatgacatacaagaacgcgaaacgtctagcaatgtggaacac
gtgaatgagggagaggagggccgtttaacgagtttaaacatggaagagtttgaggacttt
ccgcagtcgcagccgtcgagttcgggtatcacgtcttccctagtaatagaaagttcaaat
cgcacccgaatagtacacgacgtgtcggatatgagatcaaactcattcgagccacctatc
catgtatccgcggacgccgcgccgtcatcagttagatcgtcgaggacaaactggcaagtg
cggactctacgttctcagtcgagaaatccgcgggcggatagaaattcggtgagaacaaac
ttcgacatgctcgaagtgaattcaggtacgagctccgctgccgattcaagagtaaatacg
attcacaacgatgatagatcggagaatcgacatgtaaacgataataacgattcgacgcac
gatgcgtcagctgacgacagagatcgggagaatgcgcgagagtatagaactcccaggctg
caatctcaactcaacgacttgcgacgacgcaatgtgatcgacaacttttccaccggcaat
gtggaattgcacgtcagctcgagcgacgtgtgggaagcgctcgtggcgatcagagaagcc
agaaatcgtcgcgaacgagagagggagttttatcccggtgccgaaaggcgagactggttg
cccagatcgaataacggcgtcagcgtaaatatacctcgatcctcccacacggtagtaata
attggcgatcgtacgcgggtgcagagcctaccgaatcggcaaagtcagaagcccatgtac
gcgataccgaggaatcacaagattcatcagaacacacccaggttgacgcactacatcgag
gagcctaacgttggctccgggtatattaaagaattgtgcttctcggccgacggtagactg
atatgctcaccattcggttacggagtacggttattagcgttctcgaacaactgcgccgag
ttgtccaattgcgtcccgcccgccaacgagtccgtgcagcttcacgagctagcgacgcac
attggtcattccgatattgtggtcagcacgaaattctcacccaaacactatttgctcgta
tccggctgtcttagcggtaaaatcgtctggcatcagccggtagtttag
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