Linepithema humile (Argentine ant): 105675817
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Entry
105675817 CDS
T04898
Name
(RefSeq) structural maintenance of chromosomes protein 1A-like
KO
K06636
structural maintenance of chromosome 1
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lhu03036
]
105675817
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
105675817
Meiosis-specific proteins
Cohesin complex and associated proteins
105675817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Tropomyosin
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105675817
NCBI-ProteinID:
XP_012228669
LinkDB
All DBs
Position
7:7519317..7527068
Genome browser
AA seq
1230 aa
AA seq
DB search
MPVSLNAITLCNFKSIRGQVTITPFPSLTTIIGPNGSGKSNIMDGVRFVLGEKPDALRVK
CLSDLVHGAIIRTPRTEGTYVKIVFTENNNEEKSITINEETIINKEKSFTRIIHNEDSQY
DIDGEIVTHNFYMAELKKFGLDINLGNFFMPQGYIECLATKLPKELTVMFEMISGSNSYE
GIYTRLMEKNQELKMKIHYTFQMKKQLLMQKKCTIAEAEEADKYSELQEQYIEIKTQLQL
VQLLLIKKAVDTLQNKKREKKLQIEQRLFDKNNVMSLLEQHNSQFKSLSNSVEAIEKDIQ
ELDNVIQNCKNNHVRHLTTVLYWQKHRDHAHACLNNGNEARDNNIKIIQELKDELKQINK
KLKKMKEASQDIELTNSQVKHYCELKSEVEYRAKDFVEQINRLMRNQEPDRIKFENENRI
KQELEDKIKRDTFKKDNLEKCLQGLQDSDAKFKRTLESKIKDRKELIKEINTIKTTSIKL
SNDIANISKELGQADISSQEKKKVEIIKNLKQFSGVHGRLSQLCRPIHRRYYVPVIKVFG
KNIDAIIVDTTHTAIQCIQYLKQQKLAAETFLPLDSIKPVHLKENLRDIKEPKNVKLLFD
VLNVTRAEIAKAVLFVTKNVLVCETADDARRMAYEIDKHNAYDCVSLNGCFYRKDGLISG
GEADLISKAEQWMKQREYEGARDTFALEKQKEDLMKELNKLPNISLMRSDLNILKEEIEG
IFFQILEVKQDIKDSESKIKEINEILQQHAQNLSLSNSTISEIQHNMQETNQNIKSIQEH
IDTIRNEIFADFCEDINIPDISYYENKLLIYREEEEKRINLEKQYGLITTQLSFENERDT
KAPILKWKRALKKAEEELNNAQQQETIINSEIEQEEVKLSKLKMTYVKKENDLKNITESL
KKYNSELRDITKLYLENQKAHIAIQTQIDKKKAECNAILRECKMEGITVPIAKTSHGRLE
KFLSNSSPASNAESSNEWDISVMINFSLFPKNLRDSTKEGLQNIIVQLDEKLTEIQNQIK
TIVKPNLKVHEKIDPIKKHISSLNKKLKTLRQRALRTERELNEVKNERQSLFMNCLQCVA
AAVEPIYKDLVKEKSALALLVSDNTEESYAGGVHYSCIPPFKLFQPMSNLSGGEKSLASL
ALQFAIQCYKPSPFFIMDESDATLDQINIENFIHFIRSYLKSDDIKVIMITLNKSLFSHS
DALIGVTTEPDAECTESKVFSISLDKYSSC
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttccttaaatgctatcaccctttgtaattttaagtcaattcggggacaggta
acaattactcccttcccatcacttacaacaattatcggtccaaatggatctggaaaatca
aatattatggatggagtaagatttgttttgggagagaagccagatgctttgcgtgttaaa
tgcctcagtgacctcgttcatggagctattattagaacgccaagaacggaaggtacctac
gtaaaaatagtcttcacggaaaacaataatgaagaaaaaagtatcacaataaatgaagaa
acaataataaataaagaaaaaagtttcacaaggataatacataatgaagacagtcaatat
gatatagatggcgagattgtcacacataatttttatatggctgaactcaaaaaatttggc
ttggatataaacttgggcaatttttttatgcctcaaggctacatcgaatgtttggcaaca
aaactgccaaaagagctgactgtaatgtttgaaatgattagtggttcaaactcttacgaa
ggcatttacacgagattaatggaaaagaatcaggaattgaaaatgaaaatacattataca
tttcaaatgaaaaaacaattattgatgcaaaagaaatgtactattgcggaagcagaagaa
gcagacaaatattcagaattgcaggaacaatacattgaaataaaaacacaactgcaatta
gttcaattacttcttattaagaaggcagttgacaccttacaaaataagaaaagagagaaa
aaattacaaatagagcaacgtctatttgacaagaataatgtgatgtctttattagaacaa
cataattcacaatttaagtcattatccaattctgtggaagctatcgaaaaagacattcaa
gaattggacaatgttattcaaaactgcaaaaataatcacgttaggcatttaacaactgtt
ttatattggcaaaaacaccgtgatcacgctcacgcttgcctgaacaatgggaatgaagca
cgtgataataacatcaaaatcattcaagaattaaaagatgaattaaaacagataaacaaa
aaattgaaaaagatgaaagaagcatcacaggacatagaactcaccaattcccaggttaaa
cattattgcgaattgaaaagcgaagttgaataccgagcgaaggattttgtagagcaaata
aatagattgatgcgtaatcaagaaccagatcgcattaaattcgaaaacgaaaataggatt
aagcaggaactggaggacaaaataaagcgagacacatttaagaaggataatcttgaaaag
tgtctccaaggactccaagattcagacgccaaattcaaaagaactttagagagtaagata
aaagacagaaaggagttaatcaaggaaattaacacaataaaaactacatcgataaaattg
agcaacgatattgcaaatatttccaaagagcttggccaagctgatatcagttcgcaagaa
aagaaaaaagtagaaataatcaaaaatttgaaacaattttctggcgtgcatggccgatta
tctcagttatgtaggcctatacatcgacggtactatgttcctgtgattaaagtttttggt
aaaaatatagacgctattatcgttgatactacacatacagcgatccagtgtattcaatat
ctaaaacagcaaaaactagctgctgaaacatttttaccacttgattcaattaaaccggtt
catttgaaggaaaacttacgtgatataaaggaaccgaagaatgttaaattattattcgat
gtgctaaatgttacacgtgcggaaatagcgaaggcagttttatttgttaccaaaaacgtt
ttagtttgtgagaccgccgacgatgcaagaagaatggcatatgaaatcgacaaacacaac
gcttacgattgtgtttcattgaatggatgtttttatcgtaaagatggtctgatatctgga
ggagaggccgatttaatttcaaaagcggaacaatggatgaagcagagggagtatgaggga
gcacgggatacattcgcattggagaaacagaaggaagatttaatgaaggaacttaacaag
ctgccgaacatctcactcatgcgatctgatcttaatatactaaaggaagaaattgaagga
atttttttccaaattctagaggtcaaacaagatataaaagattctgaaagtaaaattaag
gaaattaatgaaatattgcaacagcacgctcaaaatctatctttgtcaaattcgacaata
tcggaaattcaacataatatgcaagaaacaaatcaaaatattaaaagcatacaggaacat
attgatacaattagaaatgaaatttttgctgatttttgtgaagatattaatataccggat
atcagctactatgaaaataaactgctgatttatagagaagaggaagagaagcgaataaac
cttgagaagcaatacggtcttatcacgactcaattatctttcgaaaacgaacgcgataca
aaagctccaattttgaaatggaaacgtgctttgaaaaaagctgaggaagagttgaataac
gcgcaacagcaagaaacaataataaatagtgaaattgaacaagaagaagttaaattatcg
aaattaaagatgacttatgtaaagaaagaaaacgatttaaagaatataacagaaagcttg
aagaaatataattcagaacttcgtgatataacaaagttatatctagaaaatcagaaagct
cacattgctatacaaacacaaatagataagaagaaggcagaatgcaatgctatacttaga
gaatgcaagatggaaggtattactgttccaatagcgaagacatcacacggtagactagaa
aagtttctaagcaattctagtcctgcttcaaacgcggaatcgtcgaatgaatgggatata
tcagtaatgattaatttttcactttttcccaaaaatctccgtgatagtacaaaagaaggt
ttgcaaaatatcattgtacagcttgatgaaaaacttacggagattcaaaatcaaattaaa
accatagtaaaacccaatcttaaggttcatgagaagatagatccaataaagaaacatata
tcaagtttaaacaagaaacttaaaacgttgcgtcagagagctcttcgtactgaaagagaa
ttaaatgaagtaaaaaatgaaagacaaagtttatttatgaattgtttacaatgcgttgct
gctgcagtagagcctatatacaaagatttggtcaaagaaaaatcggctctagcacttcta
gtatcagataatactgaggaatcgtacgcaggtggtgtacattatagctgtataccgccg
tttaaactctttcagccaatgtcaaatctatcgggtggagaaaaatcactcgctagtctg
gcattacaattcgcaattcaatgttataagccatcaccgtttttcattatggacgaaagc
gatgcgacattggatcaaataaatattgaaaactttattcattttattcgatcttacttg
aaatcggatgatataaaagttatcatgataacgttgaataaatcactgttttctcattcc
gatgcacttataggagttactactgagcctgacgcagaatgtaccgagagtaaagtattt
tccatttcattggataaatattctagctgttaa
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