Linepithema humile (Argentine ant): 105675885
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Entry
105675885 CDS
T04898
Name
(RefSeq) ran GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105675885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105675885
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105675885
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
RanGAP1_C
LRR_4
LRR_8
CDC45
DNA_pol_phi
Ubiq_cyt_C_chap
Motif
Other DBs
NCBI-GeneID:
105675885
NCBI-ProteinID:
XP_012228787
LinkDB
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Position
3:complement(595339..598921)
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AA seq
588 aa
AA seq
DB search
MATFSLSEIGEQLKDVSRKWIGVSFAGHGLVLDTANEATQVIEAIKSCACLEYLDLEGNT
LGTPAAKAIAEALKEKGTPLKKALWKDMFTGRLKTEIPKSLEYLGTALCTANSQLTELDL
SDNAFGPIGIQGLANLLTSSPCYTLQVLRLNNNGLGISGGIMLAKALEKCHENSSKEGIP
LALKVFIVGRNRLENEGAQALASVFEKLGTLEEVVMQQNGIYHVGITAIAQGLFFNPNLR
VLNLNDNTIGFKGAKALAKVLPTFRGLEELNLGDCLLKSKGAIVLAEALETHGNHTSLRC
LDLSSNEIRMDGGNAIAKATHDKTLLTNLQLDGNCFGTEGRKQLEQILTKLGRADALSSL
DEDCTEDEEEEEDEDNDDDGGRTSEECESDTEGEASDKDNKTQDNIAQNTVITAAEFLKS
PIGDKLLLLQGDNVQAFVDYAMNSANQSTEQKYIEELLRIIMKVSALCGSGYMDVRIKAE
SLSDALYAKLFSYATETNKIAILNNALLVNLGLIKGEDKKGGKIDWNLEGCFKALENISQ
KDYFLAQTRNTLKIFLERPVKISRVNVIDPLQDSKDALKTALYNIQTT
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcaacattcagcttgagcgaaattggcgagcagctgaaagatgtcagccgaaagtgg
attggagtctcttttgccggtcacggactcgtattagacactgcaaatgaagctacccaa
gtgatagaagcaataaaatcatgcgcatgtttggagtatttggatttagaagggaataca
ttgggcaccccagctgcaaaggctatagctgaagccttaaaagaaaagggaacgcctttg
aaaaaagctctatggaaagatatgtttactggtcgtttaaaaacagaaatcccaaaatct
ttggaatatttaggaacagcattgtgtacagcgaacagtcagcttaccgaacttgactta
agcgataatgcttttggcccaattggaattcagggtttggcaaacctcttgacatcaagc
ccatgttatactcttcaagtattgagattgaacaataatggtcttggtatatcaggtgga
ataatgttagctaaagcattagaaaagtgccatgagaacagttccaaagaaggtatacca
cttgcattgaaagtgttcattgttggaagaaatcgattagaaaatgagggggcacaagca
ttagcatctgtatttgaaaagctgggaactttagaggaagttgtaatgcaacagaacggc
atttaccacgtaggcatcactgcaattgcacaaggattattctttaatcccaatttacga
gtgttaaatttgaacgataatacaatcggcttcaagggcgccaaagcgcttgctaaggtt
ttgccaactttccgaggtttggaggaattgaatcttggagattgtttattgaagagtaaa
ggagctatagttctagcggaggcgctagagactcatggcaatcatacatctctcagatgt
ctggatttaagtagcaatgaaatacgcatggatggtggaaatgccattgctaaagccacg
catgataaaactctcttgacgaatctacagttagatggcaattgctttggtacagaaggc
cgtaagcaacttgaacaaattctcacaaagttgggaagggctgatgcattgagttcctta
gatgaggattgtactgaggatgaagaggaggaggaagatgaagataatgatgatgatgga
ggaagaacgagtgaagaatgtgaaagcgatactgaaggtgaagcaagtgataaagacaac
aaaacacaagataacattgcacaaaacacagtgataacagcggcggaatttttgaaatca
ccgataggtgataagctattgttattgcaaggtgataatgtgcaagcttttgttgactat
gcaatgaattcggcaaatcaaagcacagaacagaaatatatagaggaacttttgcggata
atcatgaaagtatcagcattatgtggcagtggttatatggatgtgagaataaaagcagaa
tccttatcagatgctttatatgcaaagctgttctcttatgccacagaaaccaataaaatc
gcaatcttgaataatgcactactagtcaatcttggcttaataaaaggtgaagacaaaaag
ggtggaaaaattgattggaatttggagggatgtttcaaagctttagaaaatattagtcag
aaggactatttcttagcgcaaacaaggaatacgttaaaaatatttttagaaagaccggtg
aagatcagtcgcgtaaacgtcatagatccacttcaagattccaaagatgctcttaaaact
gcgctgtacaatattcaaactacatga
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