Linepithema humile (Argentine ant): 105676468
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Entry
105676468 CDS
T04898
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105676468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhu03009
]
105676468
Ribosome biogenesis [BR:
lhu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105676468
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
WD40_Prp19
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_THOC3
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
DSE1_N
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF4
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
105676468
NCBI-ProteinID:
XP_012229807
LinkDB
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Position
3:complement(4336164..4339456)
Genome browser
AA seq
624 aa
AA seq
DB search
MASTGCSAFSQDGQYYAFCGSDGKLKIWETANGRLKHEYTPNRHLSSPWSVLEWISVSSQ
PMGNVSPTARKRRKRKSISEEADQKAIVAMGSVNGKITLYDIAAASVGATLENGHSTTVT
AMTWSAYAGLITAADDYHIVEWNLQENGIKCKWKSGKAKVTALAILSNGKSLLSAERIIK
WWNLATKQLIRTFTGHANQVTFLHVIKVNDTTNYLISGASADGHLSVWALDKHKNDKAPV
TTLAMQDEATSVSTLGMEESQIVVLATIRSGQAQLFKYQPNGHSKPLKPSLSVAVAADIS
QKETVQQTPILAGQLTEDEKLLLAYGSYSNLTFEKVTPDFSDKVQCLIRSDAKKSKEKKE
EAVSKVKSTAIEGNVEYLAPGMGVQSQKRNRTTSGSQLLLKDRLENLSLNTDANTPRRTP
TKGANTQLLMQGLNSKDKTILATALFTKDETLIRNTIAKLPVQAITPLLKELTVMLQGKT
YASKIAVMWLQALITTHAAHLMSRPDIAEILSPILSFIDAKLMLVTAIQRLRGRVSLITG
QISQAKEEHNKDIMQESMLVYQDSDSSDEGADKDDVDLNSVNSESDENWAEMSDQDVQDE
QDEEDIRSVKSEDNDVYDDDSIHS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcacggggtgctccgctttctctcaagacggtcaatattacgcgttctgcggt
tctgacggcaagttaaaaatttgggagaccgcgaacggccgattgaagcacgaatataca
cctaatcgtcacttatcatcgccctggagcgtcttagaatggatctccgtgagctcgcaa
ccgatgggcaatgtatcgccaacagcaagaaagagacgcaaaagaaagtcaatttcagaa
gaagcagaccagaaagctatagtggcaatgggttcagtgaatggaaagatcactttgtac
gacatagccgctgcctctgtcggcgctacgttggaaaatggccattctaccactgtcaca
gcaatgacttggtcagcgtatgccggattgattacagcagctgatgattatcatatagta
gaatggaatcttcaagagaacggaatcaagtgtaaatggaaatcgggcaaagcaaaagtt
acagctctagcaattctatcaaatggaaagtccttactttctgcggaaagaataatcaag
tggtggaatttagcgacaaaacaattgattcgcacgttcacaggacatgccaatcaagtt
acttttcttcatgttataaaagtaaatgatacaaccaattatttaatcagcggtgccagt
gcggatggtcatctttctgtatgggcattagacaagcataaaaatgacaaagcaccggta
acaacattagctatgcaagatgaagctacatctgtttcaacacttggcatggaagaatca
caaattgttgtattagccactattcgatcaggtcaagcgcaactgttcaaatatcaacca
aatggtcactcaaaaccgttgaaaccgtctttaagtgttgcggttgcagcagatatcagt
cagaaagagaccgttcaacagactcctattttagcagggcaattaacagaagatgaaaag
ttattattagcatacggtagttactcgaacttgacattcgaaaaagttacgcccgatttt
tcagacaaggtacaatgtttgatcagatcggacgcaaaaaaatcgaaagaaaagaaagaa
gaggcagtttctaaagttaaaagtacagcgatagaaggaaatgttgaatatcttgcacca
ggaatgggagtccagtcacagaaacgaaataggaccacttcgggttctcaattactatta
aaagacagattggaaaatcttagtttgaacacggacgcaaacacgccgagaaggacaccg
acgaaaggggcgaacacacagctactgatgcaaggattgaacagcaaagataaaacgatt
ttggcgacggcgttgttcacaaaagacgaaactttaattcgtaataccatcgcaaaatta
ccggtgcaagcgataacgccgttactcaaagaattaaccgttatgttgcaaggcaaaaca
tacgcgagtaaaatcgcggtgatgtggttgcaagctttgatcacgactcatgccgcgcac
ttgatgtcacgaccagacatcgcggagatccttagccctattttaagctttatcgatgcg
aaattgatgcttgtgacagccatacaaagattgagaggtagagtttcccttataacagga
caaatatctcaggctaaggaagaacacaataaagatataatgcaggagagtatgctggtt
tatcaagattcagattcgtcagatgaaggtgctgacaaagacgatgttgatttgaacagc
gtgaacagcgaatctgacgaaaattgggcagaaatgtcagatcaggatgttcaagatgag
caggatgaagaggacattagaagtgttaaatcagaagataacgatgtgtatgacgatgat
tcgatacacagttga
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