Linepithema humile (Argentine ant): 105676495
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Entry
105676495 CDS
T04898
Symbol
SmF
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105676495 (SmF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105676495 (SmF)
03041 Spliceosome [BR:
lhu03041
]
105676495 (SmF)
03032 DNA replication proteins [BR:
lhu03032
]
105676495 (SmF)
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
105676495 (SmF)
Spliceosome [BR:
lhu03041
]
Complex A
U1 snRNP components
Sm proteins
105676495 (SmF)
U2 snRNP components
105676495 (SmF)
Complex B
U1 snRNP components
105676495 (SmF)
U4/U6.U5 tri-snRNP components
105676495 (SmF)
Complex C
U2 snRNP components
105676495 (SmF)
DNA replication proteins [BR:
lhu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
105676495 (SmF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105676495
NCBI-ProteinID:
XP_012229861
LinkDB
All DBs
Position
3:5180838..5181141
Genome browser
AA seq
88 aa
AA seq
DB search
MAATMPVNPKPFLNGLTGKPVMVKLKWGHEYKGYLVSVDGYMNLQLANTEEHIDGNCTGN
LGEVLIRCNNVMYIRGVEESDEEGEMKD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaatgcccgtaaatcccaaaccatttctaaatggtttaactggaaaacca
gtgatggtgaaattaaagtggggtcatgagtataaaggttacttagtttcagtggatgga
tatatgaatttacagttagcaaatactgaagaacatatagatggtaattgcactggaaat
ctcggagaagtattaatcagatgcaataatgtcatgtatataagaggagtggaagaatcg
gatgaagaaggcgagatgaaggactaa
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