Linepithema humile (Argentine ant): 105676500
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Entry
105676500 CDS
T04898
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04137
Mitophagy - animal
lhu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105676500
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105676500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lhu04121
]
105676500
Enzymes [BR:
lhu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
105676500
Ubiquitin system [BR:
lhu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105676500
Multi subunit type E3
ERAD complex
105676500
LMBR1L-GP78-UBAC2 complex
105676500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
CUE
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
G2BR
Prok-RING_4
LPD39
zf-RING_Vps41
DYF4_N
DUF4874
FAR1_N
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
105676500
NCBI-ProteinID:
XP_012229875
LinkDB
All DBs
Position
3:complement(4513336..4524097)
Genome browser
AA seq
600 aa
AA seq
DB search
MPMEFLDRLPVPNLRVYTTISFAILSCSIYYATQIIKDPAWRTNHTHVDVGANAITGDDT
DPRSFGTHLKELVECMVDEPVCIWTLINMAYCVLILLGKSIQKLVFGELRASERQHLKDK
FWNFVFYKFIFVFGVLNVQYMDEVVLWWAWFTALGFLSLLSQLCKDRFEYLSFSPTTPGW
SHARLLGLLAAILALSSFMLLLCTAAAFFFISFNTFAFMAAECILLAVRTIHVMLRYVIH
LYDTRGAGTSAQRSWDKRGPLTYYTDLTSELIVLAVDFLHHVHMLLWSNIFLSMASLVIC
MQLRYLFYEIQRRITKHRNYLAVLNHMEQNYPMASQDELAENSDNCAICWEKMESARKLP
CAHLFHNSCLQSWLEQDTSCPTCRLALSMQANHRESTPEMPPEPQTPTRRNGNHFFLFLD
GSRYVSWLPSFSVEVSHNRLRGNISTLAHTNSQMDAMARQVQQLFPHYPRNVILEDLRMT
RSVEWTVENILDGVLTIPHHLIEEPQAESVPQTQTTMMNIMPSSSIQNSPDPRFDIPFAD
SGEEPSSLGGRFSKSSAERELILQRRKEHMRLTARRRYLEKYRKTEIDSANLQNTEQITS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggagtttttagaccgcttgccggtcccgaaccttcgggtgtacaccaccata
agcttcgccatactgtcgtgctccatatactatgccactcaaataatcaaggatcctgct
tggagaacgaatcacacacacgtcgatgtgggcgccaacgctataaccggagacgacacc
gatccgagaagttttggcacgcatctcaaagaactcgtagaatgcatggtggacgaaccc
gtctgcatctggactttaatcaacatggcttactgcgtgttgattcttctcggcaaatcc
atccagaagctcgtatttggtgagctacgtgcttcggagaggcaacatcttaaggacaaa
ttttggaattttgtcttctacaaattcattttcgtttttggcgttttaaacgtacaatac
atggacgaagtggtgctctggtgggcatggttcacggcgctcggttttctcagcctcctc
agccaactctgcaaggatcgatttgaatatctgtccttttcgcccaccacaccaggatgg
agtcacgcacggcttctcggattgttggcggcaattcttgcgctatcttccttcatgctt
ttattatgcaccgctgcagccttcttcttcatatctttcaataccttcgcttttatggca
gctgagtgcatcttgctcgcagtgcgtacgatccatgtcatgctacgctacgtgattcat
ctatatgatacgcgtggcgccggcacttcggcgcaacgctcttgggacaaacgcggtccc
ttgacctactacacggatttgacttcagaattgattgtgctggcggtcgactttcttcat
cacgttcacatgcttctgtggagtaacatctttctgagtatggcatcgctagtgatttgc
atgcaactgagatacctgttctatgagatacaacggagaatcacgaagcataggaactat
ttagccgtactaaatcatatggagcaaaattatccaatggcatcgcaagatgagttagcg
gagaactctgataactgcgcgatatgctgggagaagatggaaagcgctcgtaaattgcca
tgcgcgcacttgttccataattcgtgcttgcaatcctggttagaacaggacacgtcctgt
cccacttgccgattggccttgagtatgcaagcgaatcatagagagagcactccggagatg
ccaccggaaccacagactcccacgagaagaaatggtaatcatttcttcctctttctcgat
ggatcgagatatgtgtcttggttgcccagcttttccgtcgaggtctcgcacaacagattg
cgcggaaacatctccacattggcacacactaattctcaaatggatgctatggcgagacag
gttcagcaactttttcctcattatcctcgcaatgtgattttggaagatcttagaatgacc
cggtcagtcgagtggacagtggagaatatactcgacggagtattaactataccacaccac
ttgatcgaagaaccacaagcagagtccgtcccgcaaacgcaaacgaccatgatgaacatt
atgcccagttcttcgatccaaaattcgccagatcccagatttgatatcccatttgccgac
agcggagaagagccctcgagtcttggtgggcgtttctcgaaatcatctgccgaaagagaa
ctcatactccaacggcgaaaagagcatatgcgattaacagcacgcagaaggtatttagag
aagtatcgtaaaaccgagattgattcggcaaatttgcagaacacggaacagattacatcc
tag
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