Linepithema humile (Argentine ant): 105676625
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Entry
105676625 CDS
T04898
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03018
RNA degradation
lhu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105676625
09123 Folding, sorting and degradation
03018 RNA degradation
105676625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105676625
03041 Spliceosome [BR:
lhu03041
]
105676625
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105676625
mRNA degradation factors
5'-3' decay
Lsm complex
105676625
Spliceosome [BR:
lhu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105676625
Complex C
U2 snRNP components
105676625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105676625
NCBI-ProteinID:
XP_012230091
LinkDB
All DBs
Position
3:complement(3933867..3934847)
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AA seq
96 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLYSVDQYLNIKLADISVTDSEKYPHMLSVKNC
FIRGSVVRYVQLPVDEVDIHLLTEAARREAMNAQTR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgctattttattccttcttcaagtctttaatcggaaaggacgtggtcgttgaattaaaa
aatgacctaagtatttgtggcacgttatattctgtcgatcagtatttgaatataaaactg
gcagatattagtgtaacagattcagagaagtatcctcacatgttatcagtaaaaaattgc
tttatcagaggatctgtggtacgatatgtacaacttccagtagatgaagttgacattcat
cttttaaccgaagcagcgcgcagagaagcaatgaatgctcaaacaagatag
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