Linepithema humile (Argentine ant): 105676704
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Entry
105676704 CDS
T04898
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai-like isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105676704
04131 Membrane trafficking [BR:
lhu04131
]
105676704
04121 Ubiquitin system [BR:
lhu04121
]
105676704
Enzymes [BR:
lhu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105676704
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
105676704
Membrane trafficking [BR:
lhu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
105676704
Ubiquitin system [BR:
lhu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105676704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-RING_5
Prok-RING_4
zf-RING_UBOX
zf-C3HC4
DIRP
Motif
Other DBs
NCBI-GeneID:
105676704
NCBI-ProteinID:
XP_012230218
LinkDB
All DBs
Position
3:28459639..28465029
Genome browser
AA seq
479 aa
AA seq
DB search
MRIIFTSESETDSELMEENGSKRMRGRTRGRARGRARGRARGRTKKQVKVIESDDEDTPQ
QTEDSTAEAIGGEQEEHEAPTSQQPSLEQQFDLEADISQLEAPTFTTINRGPPEPMLRLR
WDHRVNLIGEKVLNPMIHCCDKCLKPILIYGRMIPCKHVFCLSCAKREDKVCPRCMEKVS
RVEQTGLGTVFMCTHGGTRYGNAGCRRTYLSQRDLQAHINHRHISAPPQPVQGMQVDPPQ
YVHAKSEMESQLTKVSSLSMQNTRLKSVQSHMVQPIMGNDPRVNSMVSQQPTLEQHRQQH
RQQQQQQQQQQQQQQQQAMMSMQSYAQTSAPPPPPPNNAPMRTNLITVPIQDTASLATHE
LHVQQSHHYYPPPPPPPQVNYGGYNVPPPVSQTTQQYYPQPQHPTQVSYVPPPPPPQQQQ
YVSSAPTSIRPSPTGYIQEPQYGPPPSQQQPPPPPQPQWSQHQQQFYSFYGNIKNAIQR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagaataatttttacatcggagtccgaaacagattcggaattgatggaggagaatgga
agtaagagaatgaggggtagaactcgtggcagggctcgcggacgtgctcggggccgagct
agaggaagaacgaagaagcaagttaaggttatcgaaagtgatgacgaagatactccgcag
caaacagaagactctaccgcagaggcaattggtggcgagcaggaggaacatgaagctccc
acgtctcagcagccttctcttgaacagcaatttgatttggaagctgatatatcgcagttg
gaagcgccaacttttacaaccattaatcggggtccgccagagccaatgttgcgtttgaga
tgggatcacagagtgaatcttattggagagaaagtactgaatcctatgatacactgctgt
gacaaatgtttaaaacccattctcatttatggtcgtatgataccttgcaaacatgtattt
tgtctctcttgtgctaaaagagaggataaagtctgtcctcgttgtatggaaaaggtatcc
agagtagagcaaactggtctgggtacagtatttatgtgcacacatggtggaacaagatat
gggaatgcgggctgtcgaagaacatatcttagccaacgggatctgcaggctcacattaat
catcggcatatatcagcaccacctcaaccagttcaagggatgcaagtcgatcctccgcag
tacgttcatgccaagtcggagatggagtcgcagttgacgaaggtgtcttccctgtcgatg
cagaacacacgactgaaatctgtgcagtctcacatggttcagccgatcatgggcaacgat
ccccgtgtaaattcaatggtgagccagcaaccaacgttggagcagcatcggcaacaacac
aggcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcaggcgatgatg
tcgatgcagagttacgctcagacgtccgcgccacctccgccgccgccgaataacgctccg
atgcggactaatctcatcaccgtgccgattcaagacacggcatctttggccacgcacgag
ctccacgtgcaacagagtcatcattattacccgccgccgccgccgccgccgcaagtcaac
tatggtggctacaacgtgccgccgccggtgtcgcagacgacgcaacagtactatccgcag
ccgcagcatccaactcaggtgtcgtacgtgccaccgccaccgccaccgcagcagcaacag
tacgtgtcatcggcaccgacctccataagaccatcgcccactggttacatacaggagcct
caatatggtccgccgccatctcagcaacagccgccaccgccaccgcagccacaatggtcg
cagcatcaacagcagttttatagtttctacggcaacattaaaaatgctattcaaaggtaa
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