Linepithema humile (Argentine ant): 105676826
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Entry
105676826 CDS
T04898
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lhu03037
]
105676826
Cilium and associated proteins [BR:
lhu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
105676826
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
105676826
NCBI-ProteinID:
XP_067216631
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Position
8:9860933..9936877
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AA seq
969 aa
AA seq
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MASSTEDYGSELQELQWGGGTTGTHFLRGAGGGSHYLRSGTGGCYEAEDLEPASSSRHHG
VQHRGYYSPPGTSYTIVERPPSAPHHHSSHATPYRSHRGHGGTTGTGAISPEQVLRLFGN
SVAERRQADRRSPASSPASVTTVRGTPTASASSQQQQSQQQQQSQQSQQQQQQSGNAGNP
PTSPISQPLSLQELTVRTITMTRDPPDSHHGFGICVKGGKDAGEIRSTFRLPPSPYFVPR
ERVCELFSGVGVYISRVEEGSVAERAGLRPGDTILEVNGTPFRAVTHEEALKMLKSCRTL
SMTVRGPALDPRCRGGHPAWSSSGRPQSCSWMDRQGRPASPPPQHPPRDSRYGPRTRKVE
LCIEPGQSLGLMIRGGLEYGLGIYVTGVDKDSVADRAGLLVGDQIIEVNGQSFEEATHDE
AVQILKTNKRMSLLIRDVGKVPHSCTTSQPIVIPTTRYSEHDPLLLESPGNHRPPSPASS
TNEWRHRGGVHTVSAATAAMVEEKARVVLARSERAALSQLLADYRTRRLTIEDLVVSLAD
LLNTHEKLTLLTELRELVDNKDRAAFDDLVYRPRIAMTRRKGDRAHSDLIVTPSLHDLPR
GVPGGCCRPGRLVDVEGDPLGVTGPLLPRDNQEYRSPSEDSGLGADMPRTRVGCRRAQQH
QVTTSDLALSNDDECDNQDYDDEIENGRGRRHSSPGGSRGNPRDYGHHLHPDNLESDGGC
EGSDAEMIGNGRRGGVAGERDRDLDEDDELECREERSSESGGGGGGGFGGWRSHLLGGLT
QRVKSWYWGARPLELAHKLSRSFDMQEAQLLEEGGGAGGGPAGGGTAGGPPRRHHSVQRL
SRNEMSERREEDGALVVPDHQGNLRITVKKTKSILGIAIEGGANTKHPLPRIINIHDNGA
AYEAGGLEVGQLILEVDGQKVEGLHHQEVARLIAESFARRDRNEIEFLVVEAKKSNLEPK
PTALIFLEA
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggctagcagcacggaggactacgggtccgagctgcaggagctgcagtggggcggcggc
accactggcacgcactttctgcgtggtgccggcggcgggtcgcactacctgcgtagcggc
accggcggctgctacgaggccgaggatctcgaaccagccagctcgagccggcatcatggc
gttcaacatcgcggctactacagcccgcccggcaccagctacaccatcgtcgagaggccg
cccagcgcgccccatcatcattcctcgcacgcgaccccctacagatcacaccggggtcac
gggggaaccaccggcaccggtgccatctccccggaacaagtgctcagactgttcggcaac
agcgttgccgagcgtcgtcaagctgaccgcaggtcacctgcgtccagcccggcaagcgta
acgacggtgcgcggcacgccgaccgcttccgcctcctcgcagcagcagcagtcgcagcag
cagcagcaatcgcaacaatcgcagcaacagcagcagcagtcggggaacgccgggaatccg
ccgacgtcgccgatctcgcagccgctcagtctacaagagctcaccgtaaggacaatcacc
atgacgagagatccgccggactctcaccatggctttggcatctgcgtgaagggtggcaag
gacgcaggtgagatccgaagtaccttcaggctacccccgtcgccgtacttcgtacctcga
gaacgagtttgtgaactgttctcaggggtgggcgtctacatctcgcgagtggaagaaggc
tcggtggcggagcgcgccggactcaggccgggcgacaccatcctggaggtgaatggcaca
cccttccgcgcggtcacccacgaggaggcactcaagatgctgaagtcctgcagaaccctg
agtatgacggtgcgcgggcccgcgctggacccgcgctgccggggcggtcaccccgcgtgg
tcgtcgtcggggcgtccgcaatcctgcagctggatggaccgccaaggtcgtccagcatcc
ccgccgccccaacacccgccccgcgactcccgttacgggcctaggacacggaaggtcgag
ttgtgcatcgaacctggccagtccttaggcctgatgatccgcggcggcctcgaatacggc
ctcggaatctacgtgaccggcgtcgacaaggacagcgtcgccgatcgcgccggcctcctc
gtgggcgatcaaatcatcgaagtgaacggacaaagcttcgaggaggcgacgcacgacgag
gccgtccagatcctgaagaccaacaaaaggatgagtctgctgatacgcgacgttggcaaa
gtgccccattcatgtaccaccagtcaacccatagttatcccgactactcggtattccgaa
cacgatcccttgctcctggagagccccgggaaccatcgtccacccagccccgcgagcagc
acgaacgagtggagacatcggggtggcgttcataccgtttcagcggccaccgccgctatg
gtggaggaaaaggcaagagttgtgctcgctaggagcgagcgagccgcgctctcgcaactc
ctggcggattacaggacgaggcggcttacgatagaggatctggtggtcagcctggcagat
ctgctcaatactcacgagaagctgacgctactgacagagctcagggaactcgtcgacaac
aaggacagagcggccttcgacgacctcgtctaccgaccccgaatagcgatgactaggaga
aaaggagaccgcgctcactcagacttgatagtgactccctcgctgcacgatcttccgagg
ggtgtgcccggtggttgttgccgtccgggacgactggtggacgtcgagggagatcctctg
ggagtgacgggccctcttctaccgcgggataaccaggagtataggtcgccgagcgaggac
agcggtctcggggccgacatgcccaggaccagagtgggctgcagaagggcgcagcagcac
caagtgacgacctccgacctcgctctctccaatgatgacgagtgcgacaatcaggactac
gacgacgagattgagaatggacgaggtcgcagacatagttctccaggcggttcgcggggc
aaccctagagattacggccaccacctgcacccggacaatttggagagcgacgggggttgc
gagggtagcgacgccgagatgatcggtaacgggcggcgcggcggcgtcgccggcgagcgg
gatcgcgatttggacgaggatgacgagctcgagtgcagggaggaaaggagctcggagagt
ggaggcggaggtggtgggggtttcggtggttggaggtcccacctgctcggtggccttacg
caacgcgtcaaatcctggtactggggcgccaggcccctcgaactcgcgcacaagctctcg
cggagcttcgacatgcaggaggcacaattgttggaggaaggtggcggtgccggtggcggg
cccgctggcggcgggaccgcgggcggcccgccacggcgtcatcacagcgtgcagcggctg
tctcgcaacgaaatgtcggaacgcagggaggaggacggcgccctggtggtgccggatcat
caaggcaacctgcgcatcaccgtgaagaagaccaagtcgatcctcggcatcgccatcgag
ggcggtgcaaacaccaaacacccactgccccgaatcatcaacatacatgacaacggagcg
gcttacgaggctggtggcctcgaagtcggccagcttatcctcgaggtcgacggtcagaaa
gttgaaggactgcatcatcaagaggtcgcacggttaatcgccgagtcgttcgcgcgccgc
gaccgcaacgagatcgagtttctggttgtagaagcgaagaagagcaacctggagccgaag
ccgacggcgctcattttcctggaggcgtag
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