Linepithema humile (Argentine ant): 105677017
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Entry
105677017 CDS
T04898
Symbol
Atg18a
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04136
Autophagy - other
lhu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105677017 (Atg18a)
04136 Autophagy - other
105677017 (Atg18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105677017 (Atg18a)
03029 Mitochondrial biogenesis [BR:
lhu03029
]
105677017 (Atg18a)
Membrane trafficking [BR:
lhu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
105677017 (Atg18a)
Mitochondrial biogenesis [BR:
lhu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105677017 (Atg18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
WDR55
DUF7165
VID27
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
BCAS3_WD40
EIF3I
Beta-prop_Vps41
Ge1_WD40
DUF7476
Motif
Other DBs
NCBI-GeneID:
105677017
NCBI-ProteinID:
XP_012230718
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All DBs
Position
6:25854453..25863186
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AA seq
452 aa
AA seq
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MNLATNQTSDTTSEAQNNGPYFVNFNQDCTSLAVGSKSGYKLYSISSTGHLEKIYENDDT
DFEDICIVERLFSSSLVAIVSLKSPRTLTVCHFRKGTEICNYSYSNTILAVKLNRARLVV
CLEESLYIHNIRDMRVLHTIRDTPPNLTGLCTLSPNSDNCYLAYPGSNTIGEVQIFDAIH
LQAKTMIPAHDSPLAAIAFSSTGTKVATASEKGTVIRVFDVHEGTKLFEFRRGVKRCVTI
SSLSFSMDSMWLCCSSNTETVHIFKLEEPKETPNKQTADEAQGWMGYLTKAVTASATYLP
SQVTDVFTQGRAIACVHLPFQGLKNVCAITVTHKVPKLLVASADGYLYVYSMDLTDSNSC
TLIKQHRLDDKERDESDGGSGSGATATANSTNAACINSYAGVLRGRSPDSMSGTESEKYQ
EMIAATESPPKGGGPFRLDDDTEFPPVTQRTD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgcaaccaatcagacgtccgacacgacgtccgaggcgcagaacaatggtccc
tacttcgttaacttcaatcaggactgcacgtccctggcagtgggatcaaagtcaggatat
aaactttattcaatcagttccactggccatcttgagaaaatatatgaaaatgatgataca
gactttgaggatatatgtattgttgagcgattgtttagcagcagtttggtggcgattgtt
agtcttaaatctcctcgtacgctcacggtatgccactttaggaaaggaacagaaatatgc
aactacagttactccaatacgattttggctgtgaaactcaacagagctagattggtcgta
tgtctggaagaatcgttatacattcataatatacgagatatgagagtgttgcatacaatt
cgcgacactccacctaatctaacaggcctttgtacactatcaccaaatagtgacaattgt
tatttagcttatccagggtcgaacactattggagaagtccaaatatttgatgcgatccat
cttcaagccaaaacaatgatacctgcacacgatagtccattggcagcaatcgctttcagc
tcgactggcaccaaagtggcaacagcttccgaaaaaggcactgtgattagagtctttgat
gtccacgagggtacaaagttattcgaatttcggcgcggagttaagagatgcgtcacgata
agcagtctttcatttagtatggattctatgtggctctgttgctctagtaatacagaaact
gtgcatatattcaaattggaggaaccaaaggaaacgccaaacaagcaaactgcagacgaa
gcccaaggctggatgggatacttgacgaaggctgtgacagcgtcggctacatacttgccg
tcgcaagtgactgatgtttttacccaaggacgtgctatcgcctgcgttcatctaccgttt
caaggattaaaaaatgtctgtgccatcactgtaacacataaagtaccaaaactattagta
gctagtgccgatggttatttgtatgtctactccatggatttaacggacagtaatagttgc
actcttataaaacagcatagattagatgataaagagcgagatgagtcggatggcggttct
ggttccggagcgacggctaccgcaaatagtacaaatgcagcctgcataaatagctacgcg
ggtgtgttgcgtggccgctcgccagactccatgtcaggtactgagtcagagaagtatcaa
gagatgatagcggcgacggaaagcccaccgaagggcggcggcccgttccgtctggacgac
gataccgaatttccacctgtcacgcaaaggacagactga
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