Linepithema humile (Argentine ant): 105677033
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Entry
105677033 CDS
T04898
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105677033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lhu03036
]
105677033
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
105677033
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
105677033
NCBI-ProteinID:
XP_012230757
LinkDB
All DBs
Position
6:complement(5260211..5311531)
Genome browser
AA seq
1103 aa
AA seq
DB search
MIGTTCNLEDACWQAQDMVNQMPKSWKNSLALTLDKSQKKEQSHSRHSIQSKLTRLYFEE
LYKVPHATPDSVLYNLENECDLLGRLVQREGLHTLIVNLYAGNKGYSLAVRNSDKGNQYD
KNSLLAETQLMGYEQGELLSCIDNGQLPAMLAEQLEYNYSHLFYDGCIIAEVRDYRKAFP
HNKAEIHHVLLKPTTQSVLSDVSTLTSSGDWSHEERLMLESHLVAATQGPLCLDPNPVPT
LASTRIKQSKSLLTDHQLMRQAKKFSQVTVNRKRKLEQLAPPDGQPIHELMQKLRAKRRG
LATSTACPPPSFTNPPLLPPSSPIEVLRYAKAYERPRETKDCSPQVIEEYILEPAESQDY
IKLSILQRPATSEYLGELFIDKNPRDGEKNGSSCRFTLGTRSVANYYYQQFKDILTENGR
KNVRIKHIVPGQAPRVACPSGMQRAHQQAQQAKAAQFSVQQLQQAQSQHVTQQQVRASFQ
ILSRAQGQLNTLAGQVTTASTQNNLTCVDPANMPQVIPQNDATALSVGQSLANGGPNAST
SVQIDNSAMTITDNTYNGSGILVFQQKSAGTINNAASTNVPVLQAQLQAGTQNCIGETAN
QNQNEPPFKKHSTNPAINALVTSLMNSAQQFTQQQAAANAAAAAMNNNVQATNKSNNAAI
LNLLNSTPANLAQQKVQPRRISLNASIPPRVISHGNVINVPSTTGQVRLNLNSALTGQLG
CKQQPMKATAVRLARVQDPTSTLGLSMPGLSALLAGKVNDICRLKICENSKEICCTPSAD
NPIPGMNSTSSLLERLTASSSQSSQPASPMTSPSPTNVNLQGVNLTSLPNSINGLQNVQV
SFPGLSQPITMSLNVSPTTGATVTPTGVIVSLPISSATNTCTTVSSMVPATVVTTTIAGS
TPTVVIANPANAHLSLPIAQIIPSGVKGLSQQNIRSNNAVTLAQGGQAIQLIGSQRPRLN
HMTRQVQSNQVKSAVLSNQLMTVAKTVTANQLILSGNKQVLTPIMAATKPVLMASQTTPS
SQVVPVNKQTLLTKSFHTRASTGQCSQQTQSLGVATLSPQQLQQLQQCLATQNKITVATG
NSQTRTQIEAQRSSTSAPGEDPA
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgattggtacaacctgtaatttggaagatgcgtgttggcaggctcaggatatggttaat
caaatgcccaaaagttggaagaattcattggccttaacgttggataaatctcagaaaaag
gaacagagtcactccaggcatagtatccaatcaaaactcacgagactctattttgaagaa
ctttacaaagttcctcatgcaaccccagattcagttttgtacaatcttgagaatgagtgt
gatcttttggggcgattagtgcaaagagaagggttacatacattaattgttaatctctat
gctggtaataaaggatactcattagctgtaagaaatagtgataaggggaatcaatacgac
aaaaattcattgctagctgagactcaactcatgggttacgaacagggtgaattactttca
tgtatagataatggccaactgccagctatgctagctgaacaattagaatacaattattca
catttattttatgacggctgcataattgctgaagttcgcgattatcgaaaggcatttcct
cacaataaagccgaaattcatcatgtacttcttaaacctacaacacagagtgtactctca
gatgtgtcgacacttacgagcagtggagattggagccatgaggaacggttaatgttggaa
tcccatttggtggcagctacccagggtcctttatgcctagatccgaatcctgttccaact
ttagctagtacaagaattaaacagtctaaatcattgcttaccgatcaccagctcatgcga
caagccaaaaagttctctcaggtcacagtaaatcgaaaaagaaaattggaacaattggca
cccccggatggacaaccgatacacgaattaatgcagaaattgcgtgcgaaaagaagggga
ttagcgacaagcactgcctgcccaccgccttcttttacaaacccccctctgcttccaccg
tcttcaccaatcgaagtcttaagatacgcgaaagcatacgagcggccacgagaaacaaaa
gactgttcgccacaagttatagaagagtatatattagagcctgcggagagtcaggattac
ataaagctctcgatcctgcagagacccgctacttccgagtacctgggagagctttttata
gacaaaaatcctcgggatggagagaaaaacggatcttcttgccggtttacattaggcacc
agatccgtagccaattattattatcagcagtttaaagatatactcacggagaacggcagg
aagaatgtgcgaataaaacatattgtgccaggccaagctccacgcgtggcatgtccatct
ggcatgcagcgagcacatcaacaggcgcaacaagcaaaagcggcgcaattttcagttcaa
cagctgcagcaagctcaatcgcaacacgtgacacaacagcaagttcgcgcgtcatttcag
attctgtcacgggctcaagggcaattgaacacattggctggtcaagtaaccaccgcctcc
acacaaaataatctgacgtgcgttgatccggcgaatatgccgcaggttattccgcagaac
gacgctaccgcattgagcgtaggacaatctctggccaatggcggccccaacgcgtcgact
tccgtgcaaattgataattccgcgatgacaataacggacaacacctataacggttctggt
atcttggtctttcaacagaagtcggctggcaccattaataatgcggcatctaccaatgtt
ccagttttacaagctcagttgcaagcgggaacgcagaattgtataggtgagacggctaat
cagaatcaaaatgagccgccgttcaagaaacactcgactaacccggcgataaatgctctt
gtcacttccctcatgaattccgcgcagcagttcacacaacaacaagccgcagccaacgct
gccgccgcagctatgaacaacaatgtgcaagctacaaataagtctaacaacgccgctatc
ctcaatttgttaaatagcactcctgcgaatttagctcagcagaaagttcaacctcgaagg
atctctctcaatgcttccatcccacccagagttattagtcatggcaatgtgattaatgtg
cccagcaccacaggccaagtacgattaaacttgaactccgctttaacgggacagctcggt
tgtaagcaacaaccgatgaaagcgactgctgtaagacttgcgcgagttcaggatcccacg
tctacacttggtttatcaatgccagggctgtcggcattgcttgctggtaaagtgaacgat
atctgtaggttaaaaatatgcgagaacagcaaggaaatatgttgcacgccgtcggcggat
aatccgatacctggaatgaactcgacttcgtcgctgctcgaacggctcaccgcttcttcc
agtcagagcagccagccagctagtccgatgactagcccctcgccgactaatgtgaatcta
caaggcgtaaatctcactagtctgccgaattcaatcaacggtctgcaaaatgttcaggtc
tcgttcccgggcttatcgcagcccatcacaatgtcgttgaacgtgtcgccgaccaccggt
gccactgtcactcccactggggtcattgtctctctccctatatcgtccgccacaaatacc
tgcacaacagtctcgagtatggttccagcgactgttgttacgacgactatagccggcagt
acgccaaccgtggtgattgccaatcctgctaatgctcatctgtctttaccaatcgcccaa
ataataccatctggggtaaaaggactatcgcaacaaaatataaggagtaataatgcagta
actcttgcacagggaggacaagcaatccaactcattggatctcaaaggccgcgacttaat
catatgactcgtcaagtacaatcgaatcaagttaagtcagctgttttatcgaaccagctg
atgacagttgccaaaacagtaacggcgaatcagttgatattgtccggtaacaaacaagta
ttaactcctataatggctgcaacgaaacctgtgcttatggcgtcgcagacgacgccttct
tcccaagtagtacctgttaacaaacaaactctattgacgaaatccttccacactagggct
tctaccggccaatgcagccagcagacgcaaagtctcggggtagctactctgtcgccgcaa
caacttcagcagttgcaacaatgtttagctacgcagaataaaatcactgtcgctacggga
aattctcaaactaggactcaaattgaagctcagagaagttccacgtctgctcccggggaa
gatcccgcctga
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