Linepithema humile (Argentine ant): 105677049
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Entry
105677049 CDS
T04898
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04136
Autophagy - other
lhu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105677049
04136 Autophagy - other
105677049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105677049
03029 Mitochondrial biogenesis [BR:
lhu03029
]
105677049
Membrane trafficking [BR:
lhu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
105677049
Others
Specific organelles associated proteins
Auto phagosome
105677049
Mitochondrial biogenesis [BR:
lhu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105677049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
ATG16
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
eIF2A
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD40_RFWD3
Cytochrom_D1
Beta-prop_SCAP
Beta-prop_Vps41
Cluap1
Ge1_WD40
DUF4407
Motif
Other DBs
NCBI-GeneID:
105677049
NCBI-ProteinID:
XP_067213643
LinkDB
All DBs
Position
6:25158701..25419315
Genome browser
AA seq
426 aa
AA seq
DB search
MFTLNLLSGKSVVLRRTKNGSVAPLRFLSVRADQTEEMASNEAGKPLVSREDINWRKDII
SQLRERNRSQTTCFAELISLHNRLFESVNTLRNTNMQLTIANETLRRESGNGTPGLSGNS
DLEARLLKQAEELAMLHKRKGEHTQQIVDLNNKLQNMTKELQAKEASLAESLETNNNLHV
EISKYIAKEKELEGVSQMLKDEHQALQLAFASLEEKLRKTQEENRQLIERLIKYKARDAE
KMNEENDNFLSFTSPSAFLMHTLSKFGKRQAKLQKELEDAARDTRPVSPDRLSLKEGIAG
LPTAVPTKVSVTFSAHEGEVYAVKWSPTDRTLATGGADRKVKLWNITKGTSESKGNLVGS
NAGVMSVDFDSTGTLILGASNDYASRVWTVSDFRLKVSLRVRGGLRVEHRGKPGGNVHGM
CIRVRV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttcactctcaatcttctctctggtaaaagcgtcgtactgcgtcgtacgaaaaacggc
agcgtggcccctctcaggtttctctctgtgcgtgcggatcagacggaagaaatggcctca
aatgaagcaggcaagccgcttgtatcccgagaagacatcaactggcgaaaggatataatt
tcacagttacgcgaaaggaacagatcgcaaaccacttgttttgcggaactcataagccta
cataataggttatttgaaagtgtaaacacattacgaaatacaaacatgcaattgacaatt
gcaaatgagactcttcgtcgtgaatcgggaaatggcactcctggtttaagtggaaattcg
gatctcgaagctagacttttaaaacaagcagaagaattggcaatgctgcataaaaggaaa
ggagagcatacacaacaaatagtagatctcaataataaactgcagaacatgacgaaagaa
ctacaagcaaaggaagccagtcttgcggaaagtttggaaactaacaacaatttacatgta
gaaatatctaaatacattgctaaagaaaaagaattagaaggtgttagtcagatgctcaaa
gatgaacatcaagctttgcaacttgcttttgcatctttagaagaaaaacttaggaaaaca
caggaagaaaatcgacaactgattgaacgcttaataaaatataaagccagagatgcagaa
aaaatgaatgaggaaaatgacaattttttaagttttacgagtccatcagcctttttgatg
catactttatcaaaatttggaaaaaggcaagcaaagttgcaaaaagaattggaagatgca
gcacgtgataccagacctgtcagtcccgatcgtttaagcttaaaagaaggaatcgctggt
cttccgacagcagtgccaacgaaagtatccgtaacatttagtgcccatgaaggggaagtt
tacgctgttaaatggtcgcctaccgacagaactctggctactggtggtgctgacagaaaa
gtcaaactttggaatattactaaaggcacatctgagagcaaaggcaacctcgttggcagc
aacgctggtgtgatgtcagtggatttcgactcgacgggcacgcttatcctcggagcatct
aacgactatgcaagccgcgtctggaccgtcagtgattttcgtctaaaggtaagtttgcga
gtgcggggaggattacgtgtggagcatcgcggaaagccaggagggaacgtacacggtatg
tgtatccgtgtacgtgtgtga
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