Linepithema humile (Argentine ant): 105677161
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Entry
105677161 CDS
T04898
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105677161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105677161
03110 Chaperones and folding catalysts [BR:
lhu03110
]
105677161
04121 Ubiquitin system [BR:
lhu04121
]
105677161
Enzymes [BR:
lhu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
105677161
Spliceosome [BR:
lhu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105677161
Complex C
U4/U6.U5 tri-SnRNP related factors
105677161
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
105677161
Chaperones and folding catalysts [BR:
lhu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
105677161
Ubiquitin system [BR:
lhu04121
]
Ubiquitin ligases (E3)
U-box type E3
105677161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
zf-Nse
U-box
JetD_C
DUF4047
Motif
Other DBs
NCBI-GeneID:
105677161
NCBI-ProteinID:
XP_012231003
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All DBs
Position
1:complement(10958884..10962271)
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AA seq
523 aa
AA seq
DB search
MGKRQHQKDKMYLTYTEWTTLYGGRKSGTTLETSEEKTFRRLPYDCCCLTLQPFEHPYCD
PQGNVFELEAILAYIKKHKHNPVTGKPLDAKSLTKLNFHKNIEDQYQCPVLFKLFTKHSH
IVAIKTTGNVFSYEAVEQLNIKTTNWKDLINDQPFTRNDIITIQDPNNAMKFNLSSFHHI
KNNIRMEDEETVRERNNPNAKLKTVSVETKEILAELERDYKPTTSGIKGEGSTKKADKFN
AAHYSTGAVAAGFTSTVMPAETTHQAAVIAEDLVRYERVKKKGYLRLLTNFGALNLELYC
DLVPKTCENFMKHCQNGYYDGTKFHRSIRNFMIQGGDPTNTGNGGKSIWGKPFEDEFKPN
LVHQGRGILSMANSGPNTNGSQFFITFRSCRHLDRKHTVFGKIVGGLDTLNAIEKIEVDN
KDRPIEDIIVQAIQIFVDPFQEADDQLATERAVELERLAREANQNKSKDKSDRNDTQKVY
RSGIGKYMKLEQEKLKVDTNSEPARKKKKVASQSYGDFSSFTF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacgccagcatcagaaagataaaatgtatttaacatacacggagtggacaacg
ttatatggtggaagaaaatcaggaacaactttagaaacgagtgaagagaaaacatttaga
cgtctaccatatgattgttgctgtctaacgttgcaaccttttgagcatccttactgcgat
ccacagggcaatgtattcgaactggaagctattttggcatatataaaaaagcacaagcac
aatcctgtgacggggaaaccactggatgcaaaaagtctaaccaaattaaattttcataaa
aatatagaagaccaatatcagtgtcctgttctttttaagttattcacaaaacattcacat
attgttgctatcaagacgacaggaaatgtattttcttatgaggctgttgaacaattgaat
ataaaaactacaaattggaaggatttgataaatgatcagccattcacacgcaacgatatt
attacgattcaagatccaaacaatgcaatgaaatttaatctgtcttcttttcatcacatt
aaaaataatataaggatggaagacgaagaaactgtaagagaaagaaataatccaaatgca
aaattaaaaactgtctcggtggaaactaaggaaattttggccgaattagaaagagattac
aaaccaacaacaagtggcataaaaggcgaagggtctacaaagaaggctgacaaatttaat
gctgcacactattctacgggtgcagtagctgcaggatttacttcaacagtgatgccagca
gagactactcatcaagcagctgttatcgcagaagatttggtacggtacgagagagtcaag
aaaaagggatatttaagattactcacaaacttcggagctttgaatctggaactttattgc
gacttggttccgaagacttgtgagaactttatgaaacattgtcaaaatggttattatgat
ggcacaaagtttcatagatcaatacgaaattttatgattcaaggcggagatccgactaat
acaggcaacggcggcaaatctatttggggcaaaccattcgaggatgaattcaaaccgaat
cttgttcaccaaggcagaggcattttgtcgatggcaaactcaggtccaaataccaatgga
tcacaattttttattacgttccgatcgtgcagacatcttgatcgcaaacatacagtcttt
gggaagatagtaggaggtttagatacgttgaatgcaatagaaaaaatagaagtggataat
aaagatcgaccaatagaggacataattgtacaggctattcagatctttgtggatcctttt
caagaagctgatgaccagcttgctacggaacgagctgtggaattggaacgattggctcga
gaagcgaatcagaacaaatcgaaggacaaatcagatagaaacgacacccaaaaagtttac
cgatccggtatagggaaatatatgaaactggaacaagagaaattgaaggtggacacaaac
tcggagccggccagaaaaaagaaaaaggttgcgtcgcaatcgtatggggatttctcttct
ttcacattttaa
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