Linepithema humile (Argentine ant): 105677186
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Entry
105677186 CDS
T04898
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03030
DNA replication
lhu03420
Nucleotide excision repair
lhu03430
Mismatch repair
lhu03440
Homologous recombination
lhu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105677186 (RPA1)
03420 Nucleotide excision repair
105677186 (RPA1)
03430 Mismatch repair
105677186 (RPA1)
03440 Homologous recombination
105677186 (RPA1)
03460 Fanconi anemia pathway
105677186 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lhu03000
]
105677186 (RPA1)
03032 DNA replication proteins [BR:
lhu03032
]
105677186 (RPA1)
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105677186 (RPA1)
Transcription factors [BR:
lhu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105677186 (RPA1)
DNA replication proteins [BR:
lhu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105677186 (RPA1)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105677186 (RPA1)
MMR (mismatch excision repair)
105677186 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
105677186 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
POT1
Pox_vIL-18BP
IBR
Motif
Other DBs
NCBI-GeneID:
105677186
NCBI-ProteinID:
XP_012231039
LinkDB
All DBs
Position
1:complement(10875176..10879415)
Genome browser
AA seq
602 aa
AA seq
DB search
MYKLTGGALDKIMNGIDIEKPVLQILGYKKLPSNTNKPPTDRYRLLISDGQRMNSFTMLA
TQLNHLITDNTLSEYAVCEISKYALSSVNNGGKEKRVMLVLGIELIAPGEEVKCKIGNPT
NVEAKPEPGNSNQPHSSTAAHQNGAAKQEKKVSNYNSSSDIATTPIAALSPYQNRWVIKA
RVTHKPPIRTWSNSRGEGKLFSIDLIDDSGEIRCTAFRDMCDKFYDMIEVGNVYYFSRCM
LKAANKQFNNLKNDFEMTMTNDTEIIPCHDNNDDIPGMQFDFVPISRVEQKEKNDIIDVM
GVVTTFSDVQHLQQRSTGRDLTKRDVNIVDDSGVTVCVTLWGKQAEDFDGSNNPILAIKQ
ARVSEFNGGKSLTIFNTSVVTKDPDLPEAHKLRGWYAAGGHAETPKSLSRQGGGGDFNAP
LHTFQEVSDARLGDKLNAADPYTVVATINLIRVENSVYKACPVDGCKKKLIDQSTGVFRC
EKCNKDFPNFSYRLIASMNIADATGSRWITAFNDDAEKILGMSAQELGELKENDNDAYMQ
KFGEASFKRFTFSMRAKSEVFQDEMRVKHNCVSVAPLNYKTHLTYLIDKVSKLAHIEKVD
SN
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtataaattaacgggaggagcgttggataaaatcatgaacggcattgacattgagaaa
ccagtgcttcaaatattgggttataagaagctaccaagcaatactaataaaccgccaact
gatcggtacagattactcatttctgatggacaaagaatgaattcattcacaatgttggct
actcagttgaatcatttaataactgacaatactttgtctgaatatgcagtttgtgaaata
tcaaaatatgctttgagttcagtaaataatggtggcaaggaaaaacgtgtaatgctggta
ctgggcatcgagctgatagctcctggcgaggaagttaaatgcaaaataggcaacccaacc
aatgtagaggcaaaaccggagccaggaaattcaaaccaacctcactcatccacagctgcg
catcaaaatggtgcagccaaacaggaaaagaaagtttcaaattataatagctcttctgat
atagccactacaccaattgcagcattaagtccttatcaaaacagatgggtgatcaaagca
cgtgtgacacataaacctccgatcagaacatggagcaattctcgtggagaaggcaaattg
ttttctatcgatttgattgatgatagtggcgaaattcggtgcactgcgttcagagatatg
tgtgataagttctacgatatgatagaggttggaaacgtgtactatttctcacgatgcatg
ttaaaggcagcaaataaacaattcaacaatttgaaaaatgattttgagatgacaatgact
aatgatacagagattatcccatgccatgacaacaatgacgacatcccgggaatgcagttc
gactttgttcccataagtcgagtggaacaaaaggagaaaaatgatataatagatgtgatg
ggtgttgttacaacgttcagcgacgtgcaacatcttcaacagcgaagtactggcagagat
ctcacgaagagagacgtcaacattgtcgatgacagtggtgtaacggtgtgcgtcacactg
tggggaaaacaagctgaagacttcgacggttctaacaatccgattttggctattaagcaa
gcgcgcgttagcgaattcaatggtgggaaaagtttgactatttttaatacatccgtagtc
acgaaggatccagatctaccagaagcacataaattgcgcggatggtatgccgcaggtggt
cacgcggagactcccaaatcattgtctagacaaggtggcggtggtgatttcaacgcgcca
ttgcacaccttccaggaggtgagcgacgcgcgattgggtgataaattgaatgccgcagat
ccatatacagttgtggcaactattaacctgattcgagtggaaaattccgtttacaaggcc
tgccctgtagatggttgcaagaaaaagttgattgatcaatctaccggagtattcagatgc
gagaaatgtaataaggattttccgaatttttcatatcgcttaatagcaagtatgaatata
gcggatgcgacaggcagtcgctggataactgccttcaacgatgatgccgagaagatattg
ggaatgtcggcacaagaattgggagaactgaaggaaaacgataatgacgcctatatgcag
aaattcggcgaggcgagcttcaagagatttacgtttagcatgagggcgaaatcggaagtt
tttcaggatgaaatgagagtgaaacacaactgcgtgtcagtcgctccattaaattacaaa
actcatctgacatatttgatagacaaggtttccaagctggcgcacattgaaaaagtcgat
tccaattag
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