Linepithema humile (Argentine ant): 105677199
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Entry
105677199 CDS
T04898
Symbol
Polr2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03020
RNA polymerase
lhu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105677199 (Polr2A)
09124 Replication and repair
03420 Nucleotide excision repair
105677199 (Polr2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhu03021
]
105677199 (Polr2A)
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105677199 (Polr2A)
Enzymes [BR:
lhu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105677199 (Polr2A)
Transcription machinery [BR:
lhu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105677199 (Polr2A)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105677199 (Polr2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
105677199
NCBI-ProteinID:
XP_012231063
LinkDB
All DBs
Position
1:complement(10265475..10274393)
Genome browser
AA seq
1906 aa
AA seq
DB search
MATSDSKAPLRTVKRVQFGILSPDEIRRMSVTDGGIRFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFITKTIKILRCVCFYCSKLLVGPHNPK
IKEIVMKTKGQPRKRLAFVYDLCKSKNICEGGDEMDINKENAESQPQMERKPGHGGCGRY
QPNLRRSGLDVTAEWKHVNEDTQEKKINLSAERAWEILKHIKDEESFILGMDPKFARPDW
MIVTVLPVPPLSVRPAVIMYGSAKNQDDLTHKLADIIKSNNELLRNEQSGAAAHVILENI
KMLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVI
TPDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQILVRRGNSQYPGAKYIVRDNGERI
DLRFHPKTSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLS
CTSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRK
MTKRDVFIEKEQMMNLLMFLPSWDGKMPQPCILKPKPLWTGKQLFSLIIPGNVNMIRTHS
THPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGR
FYGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEP
TPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIAC
VGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGL
IDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLP
TIKVSNKAFEKKFKFDPTNERYLRRIFNEDIVREMMGSGEVISELEREWEQLNKDRAVLR
EIFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPMRVIQGVKDLLDKCIIVAGDD
RLSKQANENATLLFQCLVRSTLCTKCVSEEFRLSSEAFEWLIGEIETRFQQAQVSPGEMV
GALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAA
ARDAEKAKNVLCRLEHTTLKKVTANTAIYYDPDPQNTVISEDQEFVNVYYEMPDFDPTKI
SPWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDN
KFQETDEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITDTG
EFKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVL
QFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHA
EVDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKAGIEIPMAVGAGMMGTAGMFFGSVT
GMSSMSPQMTPWMGATPGYGASSMSPALSSGMTPGGACFSPSGASDASGLSPAYSAYSPQ
PGSPGSPGPSMSPFPMSPAGAASPSYSPTSPAYLPTSPSMTPSSPNYSPTSPTYSPTSPN
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNY
TPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPAS
PTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKY
SPTSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAYETDD
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtctgactccaaagcgcctttgcggacggtgaaacgcgtccaattcggcatt
ctttcgccggatgaaatacgtcgtatgtcagtcacagatggcggcatacgatttccagaa
accatggaaggtggccgccctaaattgggcggtctcatggatccaagacaaggtgttatt
gacagaaattccagatgtcaaacatgcgctggtaatatgacagaatgccctggccatttt
ggtcatatagatcttgcaaagccagtatttcatgttggattcattacaaagaccatcaag
atattgagatgtgtgtgtttctactgctctaaactgcttgttggccctcataatccaaaa
attaaagaaattgtcatgaagacaaagggacagccgcggaagcgacttgcatttgtttat
gatctatgcaaaagcaagaacatttgcgaaggtggagatgaaatggatattaacaaagag
aatgcggaaagtcagccacagatggaaaggaaacctggccacggaggttgtggtagatat
caacctaatctcagacgatctgggttggacgtcactgcagaatggaagcatgtgaatgaa
gatacacaggagaagaagataaatctttcagccgagagagcgtgggaaattctcaaacac
atcaaggacgaggaatccttcatcctgggcatggatccgaaatttgcccgaccagattgg
atgatagttactgtacttcccgtaccaccgttgtctgtcagacccgcagtcatcatgtac
ggctctgccaagaatcaggatgacttgactcacaaactagcggatatcatcaagtcgaac
aacgaattgctgcgaaacgagcagtccggtgcggcagcacacgtgatcctggagaacata
aagatgctgcagtttcacgtagcgacgctcgtcgacaacgacatgccgggtatgccgcgg
gcgatgcaaaagtcggggaaaccactcaaggcgatcaaggcccggctgaagggaaaggag
gggagaattcgaggaaacctgatggggaaacgtgtggacttctctgcgcgcaccgtcatc
acaccagatcccaatttgcgcatcgaccaagtaggcgtgccgcgcagtatagcgcagaac
ttgacattccccgaaattgtgacgcctttcaacattgacaaaatgcagatattagtcagg
cggggcaattcgcagtatcccggcgcgaagtacatcgtacgcgacaacggtgagaggatt
gatctgcgcttccaccccaagacatcggatctgcacttgcagtgcggctacagagtggaa
cggcacatccgcgacggcgatctcgtgatcttcaaccgtcagccgacgctgcacaaaatg
agtatgatgggtcaccgcgtgaaggtgttaccctggagcacattccgtatgaatctgagc
tgcacgtcgccttataatgccgactttgacggcgacgaaatgaatctacacgtgccacaa
tcgatggagactcgcgcggaggtcgaaaacattcacgtgacaccgcgccagatcataacc
ccgcaagcgaacaaaccggtcatgggtatcgtgcaggatactttaacagccgtgaggaag
atgacgaaacgcgacgttttcatcgagaaggagcagatgatgaatctgctcatgtttctg
cccagctgggacggcaagatgccgcagccgtgcatcctgaagccgaaaccactgtggacc
ggcaagcaattgttctctcttatcattccggggaatgtgaacatgatacggacgcacagc
actcatccagacgaggaggacgacggcccgtacaaatggatctcgccgggcgacaccaaa
gtaatggtcgagcacggagagctcgtgatgggtattctctgcaagaagaccctgggtacg
tccgccggatcgttgcttcacatctgtatgctggagctgggccacgaggtatgcggacgc
ttctacggcaacattcaaactgtcatcaacaactggttgctgctggagggtcactcaatc
ggtatcggcgacactattgccgatccacagacatacttggaaatccagaaggcgatcaag
aaggccaaggaggacgtgatagaggtgatccagaaggcgcacaatatggagctggagcct
actcccggtaacacgctgcgtcagactttcgagaatcaagtgaacagaatcctaaacgac
gctcgagacaaaaccggtggttccgccaagaaatctcttactgaatacaacaacttgaag
gctatggtggtgtcgggctcgaaaggctccaacattaatatctcacaggttatcgcttgc
gtgggtcaacaaaacgttgaaggtaaacgaatacccttcggtttccgcaagaggaccctg
ccgcatttcataaaagacgactacggacccgagtctcgcggtttcgtcgaaaactcgtac
ctcgccggtctcacgccgtcggagttttactttcacgctatgggcggtcgtgagggtctt
atcgataccgccgtaaagacggccgagaccggttacatccagcgtcgtctgataaaggct
atggagtcggtgatggtgcactacgacggcaccgtgcgtaactccgtcggccagttgatc
cagctgcgctacggcgaggacggcctctgcggtgagaccgtggagtttcagaatctgccc
accatcaaggtgagcaacaaggccttcgagaagaaatttaagttcgatccaaccaacgaa
cgatacctgcgacgcatattcaacgaggatatcgtccgggagatgatgggttccggcgag
gtgatctccgagctggagagagagtgggaacagttgaacaaggatcgcgccgtgctccga
gagatcttcccgagcggtgagtccaaggtcgtgctaccgtgcaatttgcagaggatgatt
tggaacgtacagaagattttccacatcaacaaacgagcgccgactgatcttagtcccatg
agggtgatccagggcgtgaaggaccttctggataaatgcatcatcgtcgccggagatgac
agactgagcaaacaggcgaacgagaacgcaactttactattccagtgcttagttcgatct
actttatgcacgaaatgcgtctccgaggagtttaggctgtccagcgaagcttttgaatgg
ttgattggagaaattgagacgcgattccagcaggctcaggtgtcacccggtgaaatggtc
ggcgctttggcagcgcagtctctcggcgagcccgccactcagatgacactgaacactttc
cactttgccggtgtgtcatcgaagaacgtaactctcggtgtgccccgattgaaagaaatc
attaacattagtaaaaaaccgaaagcgccgtcgctcacggtgttcctgacgggcgcagcc
gcgcgagacgctgagaaggcgaagaatgtactttgccgactcgagcacacgacgctgaag
aaagtgacggccaacacggcgatttattacgatccggatccgcaaaatacagtaatctcg
gaggatcaggaattcgtcaacgtgtattacgagatgcctgacttcgaccccacgaaaatc
tcgccgtggttgctgcgtatcgagttggacagaaaacggatgaccgacaagaagctgacg
atggagcaaatcgcggagaaaatcaacgccggcttcggcgatgatctaaattgcatattc
aacgacgacaacgccgagaagctggtgctgcgaattaggataatgaacagcgacgacaac
aagttccaggagacggacgaggaaaccgtagataagatggaagatgacatgtttttacga
tgcatcgaagcgaacatgcttagtgacatgactttgcagggtatcgaagctatcggcaag
gtttatatgcatttaccacaaacagactccaagaagcgcattgttatcacggacacaggc
gaatttaaggctatcgcggaatggcttttggaaacagacgggacgagcttgatgaaagta
ttgagcgagagagacgtggatcctgtaaggaccttcagtaacgatatctgcgaaatattc
caagtgctcggcatcgaggctgtgcggaagtccgtagaaaaagaaatgaatgcggtgttg
cagttttatggtctttatgtaaattatcgacatctcgctttactgtgcgatgttatgacg
gcgaagggccatctcatggcaattacacgtcacggaattaacagacaagataccggagcc
cttatgaggtgctcctttgaagaaacagtcgatgtcttattggatgctgcatctcatgca
gaggtagatccaatgcggggagtatctgaaaacattattatgggacaacttccgcgtatt
gggacaggatgcttcgatttattattggacgcggagaaatgcaaagctggtatcgagatt
ccgatggcggttggcgcaggtatgatgggaacagcaggaatgttcttcggcagtgtaact
ggtatgtcaagtatgagtcctcagatgactccttggatgggagctactccaggttacggt
gcctcaagcatgtcacccgctttgagcagtggcatgactccaggaggtgcgtgtttctcg
ccgtcgggcgcgtcggacgcgtcgggcttatcgccggcatattctgcttattcaccgcag
ccgggaagcccgggtagtccggggcccagcatgagcccgttcccgatgtcaccagcaggc
gcagcctcacctagctactcaccgacatcgcctgcgtatctgcccacgtctcccagcatg
acaccgtcgagtccgaactactcgcccacgagtccgacttactcgccgaccagcccgaac
tattcgccgacgtcgccaagctactcgccgacaagtccgagttattcaccaacgtcaccc
agttactcgccgacaagtccgagttattcaccgacgtcacccagttactcgccgaccagt
cccagttattcgcccacgtcgccgagttactcgccgacttcgccgagctactcgcccaca
tcgccaagttactcaccgacttcaccaagctattcgccaacctcaccgagttattcgccg
acatcaccaagctactcgccgacatcaccaagttactcaccgacaagtccaagttattct
cctacgtcgccgagttactcaccgacctcgccgagctactcgcctagttcgcccaactat
acacccgcgtcgccttcatactcacctacttcacccagttactcaccgagttcaccgcag
tattcgcccgcgagtccgagttactcacctagcagtccaaaatattcgccgacaagtccg
agttactcgcctacctcgccgtcgttcgccggcacgtcaccgcaatatacgcccgcgagt
cccacttactcgccgaccagtccgacatattcgcccacaagtccatcctactcgccgagc
tcgccacagcacacggcatcaggcagtacacgttactcgcccagcagtccgaattattcg
cctaccagtccgacatattcgcccacgagcccgcagtattcaccgtcgagcaccaaatat
tcacctacgagtccaacttacacacccacgagtcccagctattcgccgacaagtccaacg
tactcgccgccggtgccaggatactcacccacgagtcctacgtactcaccagcgtcaccc
gcttacgagacagatgattaa
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integrated database retrieval system
