Linepithema humile (Argentine ant): 105677259
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Entry
105677259 CDS
T04898
Symbol
Hel89B
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhu03021
]
105677259 (Hel89B)
Transcription machinery [BR:
lhu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105677259 (Hel89B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
ResIII
HEAT_2
DEAD
HEAT_MROH2B_C
HEAT_GCN1_C
HEAT_ECM29
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
105677259
NCBI-ProteinID:
XP_012231166
LinkDB
All DBs
Position
5:7195760..7205848
Genome browser
AA seq
1887 aa
AA seq
DB search
MSSRLDRLFILLETGTNAVTKRAAAQQLGEAQRLHPHDLHHLLARVSTLLKSPQWDTRVS
AAHAVQAILTQVPPWDPDPMKKESSTDESEVKKCRTSTKLSLESFDMDKVLARSSHLTGS
EGSEYDLTISEGEQLSVPNQQEKLAAKLGFHPRLMGVDTADLFSVEDFTPMVQASSMTQA
GTMPVSETLKQPEGLSRREMNRAKRKARQSVTKQRSREPDDHRANDDHSNSMNVQSPVND
IGEPAFKKLILEETISSDTGPKCSTPSEQVCGVPDGTGCWPDSVIHWPLEAFAESLCQDL
FSQKWEVRHGAATALRELIRLHGKGAGKSRDQTLEEMQESHYQWIIDAALRLLCVLGLDR
FGDFVSDQVVAPVRETCAQALGSLFKLVSGGSRAKDTNKMLFGILSLIMKLLGHDEWEAR
HGALLALKYLLAVRDDLLDEVLPKVFPTIIQGLSDPVDDVGAAAASALIPVAYALPRLLK
PAALEAIVVRLWQLLKEQDDLAAACNSFMGLLAAILSLPAARACLAPQPLSQVLPRLWPF
LSHSSSSVRKATLQTLQTLTGDDGRHTEDKKERWGEGGGVVLQEALWHVFQCVLIEHIAV
IQDVAERVWENLVVQSDLELLLHAACPHVSTWLCLAMQPEHVPFNPTLLMTVANPTKGVK
NNQTVAYCDAQSDSSNNSGGNSNANTKSLSELKVYIGGIETVALNVRKANVVQARCRASR
MLGLLSHYVVQPAPGVVYTPDMPSPALCYAKVLLAHLNSRSALQRTVVGLTMSHWATVDS
LKPPATPDILRDKLLACLNECTYYDEIATSFTKLLHQSRDYNATLKHYKLPVPVDVDSSG
VMTLDQITVLVGKTITALCAAGSGAGNNSGNQIKLKPKLLESLEERRRALKIGAATTAAE
QQSWHIMSMAALAGAATMLHCLPQAPQPLNPLVKPLMEAVKREENEELQKLAAKHLSCLI
ELCVDRKPSPNAKISTNLCTFLCSDIEFTPRVCCAGDADVYDGILTLNNRQKQAERIAYN
RGAGTGVGGGRGPGRPPTTEIPLEELLACEEPEAKAARTRRRGATLALTAIATLLGAQLP
VRLPQLWDLILPSILKDANWQDKVQEEEGNQLIFGLQVLEIMAPSLDKSLLPPVLECLPR
LCILLAHPYKAVRHMTSRCIATLASLNTEKTMIHIRHSVIPLLETTGGEKKCSSGKMAPN
EVDSIRQGAAEALTCIVETLGVHVVPYAVLFMVPLLGRMSDQNQAVRLACSATFATLVQL
LPLDPGSLADPPDLVQEKAQERKFLDQLINPRNIPDTELPVPVAAELRSYQRQGLNWLNF
LNRYHLHGVLCDDMGLGKTLQTLCILALDHHRNLQTPTSLVVCPPTLTGHWVYEAEKFFK
AQDLSVIQYAGTPLERDKLRSRVLNYRLVIASYDIVRKDIEFFEAHQWNYCVLDEGHVIK
NGKTKNAKAAKRLHANHRLILSGTPVQNNVLELWSLFDFLMPGFLGSEKQFAAKYSRPIL
ACREPKAGPKEQEAGALAMEALHRQVLPFLLRRNKEDVLQDLPPKITQDYYCDLSPLQRL
LYEDFRTRHTATLTTGSSSSSDLQTGHVFEALRYLRNVCNHPKLVLKQQHPLYQTVCDML
KQQQNTLADIEHSAKLPALKQLLLDCGIGQQARNSSAVTENSQEQQLVSQHRALIFCQLK
AMLDIVENDLLRAHLPTVTYLRLDGSIPAAQRHSVVARFNADPSIDVLLLTTQVGGIGLN
LTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLISRSTVEEKIMGLQKFKLLT
ANTVISTDNAALETMATDQLLDLFLLDNEKEKRQPDHHDDAALSKLPGLPGISRSVLDIL
PELWEQQQYDDEYDLDSFLSTLKADSQ
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaagattggatagattatttatattgctggaaacgggaacaaatgcagttacc
aaaagagcagctgcacaacagttgggagaagcgcagagattacaccctcatgatctgcat
catctattggcgagagtctcgactctgctgaaatccccacaatgggacactcgagtgtca
gcagcccacgctgtgcaggctatacttacccaagttccaccgtgggacccagaccccatg
aaaaaagaaagctccacagatgaatcagaagtgaagaaatgcagaacttccaccaaattg
agtttggagtccttcgatatggataaagttctagctcgtagctcacatctcactgggtcg
gagggcagtgaatacgatttgactatatcagagggagagcaactatcggttcccaatcaa
caggagaagctagccgcaaagctgggttttcatccacgtctgatgggtgtcgacactgct
gatttgttttccgttgaggatttcacgccaatggtgcaagcgtccagtatgacacaagcc
ggtacaatgcctgtaagcgaaactttgaaacagccggaaggcttaagtagaagagaaatg
aacagagcgaaacgcaaggcacgtcaatcagtgacgaagcagcgatcacgcgaaccggac
gatcatcgcgccaacgatgaccattcgaattcgatgaatgttcagtcgccggtgaacgat
atcggtgagcctgcgttcaaaaaattaatattagaggaaacgatctcatcggacactgga
ccaaagtgcagcacaccaagcgagcaggtgtgcggagtgccagatggaactggatgttgg
ccagattcggttatacattggcctttagaagctttcgcggagagcctctgtcaagatttg
ttcagtcagaagtgggaagtgcgtcacggcgcggcaacggctttaagagaactcataagg
ctccatggaaaaggagcaggcaagtccagagatcaaactctggaagaaatgcaagaaagc
cattatcaatggataatcgacgctgctctaagattattgtgcgtgctgggcctcgatcga
ttcggagacttcgtttctgaccaggttgtcgcgccggtgcgagaaacgtgcgcccaagca
ctgggatcgctgttcaaattagtgtccggcgggtcgcgcgccaaagatacaaacaaaatg
ttattcggaatactttccctaataatgaaactcttgggacacgacgagtgggaagcccga
catggcgcgctcctcgcactgaaatatttactagccgtacgagacgatttattggacgag
gtgttgccgaaggtctttcctaccattatacaaggattgtccgatcctgtggacgatgtg
ggcgcggctgccgcaagtgcacttataccagtggcttatgctctcccgcgattattgaag
ccagcagcgctggaagcgatcgtggtacgcctctggcaattgttaaaggaacaggacgat
ctagctgcggcttgtaacagtttcatgggtctcttggccgcgatactttcgctgccagca
gcacgcgcctgtttggcgccgcagccgctatcgcaggtattgccacgcttatggccgttc
ctcagccactcgagctcgagcgtgcgcaaagccacgctgcaaacgctgcagaccttgacc
ggggacgacggcaggcacaccgaggacaagaaggaacggtggggcgagggcggcggtgtg
gtcctgcaggaagcgctgtggcatgtgtttcagtgcgtgctaatcgaacatattgccgtg
atacaggacgtggccgagcgtgtctgggagaatctagtcgtacagagtgatctcgaatta
ttgctacacgcggcatgccctcatgtcagcacgtggctctgcctcgccatgcagccggaa
catgtgccattcaatccgactctgttaatgacggtcgcgaaccccacgaagggcgtaaag
aataatcaaacggttgcctactgcgacgcgcaatcggactctagcaataacagcggcggg
aatagtaatgcgaatacgaaatcgttgtccgagctgaaggtgtacatcggcgggatcgaa
acggtggcgctgaacgtgcggaaggcgaacgtagtgcaggctcgttgtcgagcgtctcgt
atgttgggattgctgtcgcactacgtggtgcagccggcgccgggcgtcgtttacacaccg
gacatgcccagcccggcgctctgttacgccaaggtgttgctggcgcatctcaattcgcga
tcggcgctgcagcgcaccgtcgtgggactcacgatgtctcattgggcgacggtggattcc
ctgaagccgcccgcgacaccagacatactcagggacaaactgttggcttgtttgaacgaa
tgtacatactacgatgaaatcgcgacctctttcacgaaattattgcaccaaagtcgggat
tacaacgcgaccctgaaacattataaattgccagtgccggtcgacgtggattcatccggc
gtgatgactcttgatcagatcacggtactcgttggaaaaacgataaccgctctttgcgcc
gcaggaagtggagctggaaataatagcggcaatcagatcaaattgaaacctaagttacta
gagagcctggaggaaaggaggcgagcgctaaagatcggagcggccacgacggcggcggaa
caacaatcctggcatattatgtcaatggccgcgctcgctggcgcggccacgatgttacac
tgccttcctcaagctccgcagccgcttaatccgttggtgaaaccgctgatggaagctgta
aaacgcgaggaaaatgaagaactgcaaaaactggctgcgaagcatttgtcttgtttgatt
gaactgtgcgtcgacagaaaaccctctccaaacgcaaagatttccaccaatctgtgtacg
ttcttgtgttccgacattgaattcacgccgcgcgtatgttgcgccggcgacgctgacgtt
tacgacggaatacttactttgaataatagacagaaacaagctgaaagaatagcgtataat
cgtggtgctggcaccggggtcggcggtggcagaggtcccggtcgaccgccgacaacggaa
atacccttggaagagttactggcttgcgaagaaccggaagccaaagccgccagaacacgt
cgccgcggagccacattagcattgacagctatagctactcttctcggtgctcaattgccg
gttcgtctacctcagctgtgggatttgattttgccgagtatactaaaagacgcaaactgg
caggataaggtacaagaggaggaaggaaatcaattgatcttcggcttgcaagtgttggag
attatggcgccgagcttggacaagtccctcttgccgcctgtgctggagtgtctgccgcgt
ttgtgcattctattagcgcatccgtacaaagccgtcaggcatatgacatcacgatgtata
gctacgctagccagtttaaatacggagaagacaatgatacacataaggcatagcgtcata
ccgcttctggaaacgaccggcggtgagaaaaaatgttcctcaggcaaaatggcaccgaat
gaggtcgattcgatacgccagggagccgcggaggctctgacttgcatcgtcgaaacattg
ggcgtccacgtggtgccgtacgctgtactctttatggtgcctttactcggacgtatgagc
gatcagaatcaagctgtaagattagcctgcagcgcgacattcgccacacttgtccaactg
ttaccgctggatcccggctcactcgcggatccgccggatttagtacaagagaaggcacag
gagcgaaagttcctcgatcagctcataaatccccgtaatatccccgacacggagctgccg
gttcccgtagccgctgagctacgctcttaccaacgtcagggcttgaattggctcaacttt
ctaaatcgctaccacctgcacggagttctgtgcgacgatatgggtctcggaaaaacgctg
caaactctctgcatcctggcgctggaccaccatcgcaatttacaaacaccaaccagccta
gtggtgtgcccgccgactctcaccggtcactgggtgtacgaagccgagaagttcttcaag
gcgcaggatctgtcagtcatccagtacgccggcacgccgctggagcgcgacaaactgcgt
tcccgcgtgctgaattatcggctcgtgatcgcgagttacgacatcgtgcgcaaggacatc
gaattcttcgaggcgcaccaatggaattactgcgtgctcgacgagggccacgtgataaaa
aacggcaagacgaagaacgccaaggcggcgaagcggctgcacgctaatcacaggctcatc
ctgtccggcacacctgtgcaaaacaacgtactcgaattgtggtctctgttcgactttctg
atgccgggcttcctcggcagcgagaaacaattcgccgccaagtattctcgtcccattcta
gcctgcagagaaccgaaggcagggccgaaggagcaggaagccggcgctttggccatggag
gctcttcatcgacaggtactgccgttcttgctgaggcggaacaaggaagatgtgctacag
gatctgccgcccaaaatcacgcaggattattactgcgatttgtcgcctctgcaacgtcta
ctttacgaagacttccgtactcgtcatacggcaacgctcaccaccggctcttcgtcttcg
agcgatcttcaaactggccacgtattcgaggcgttacgatacttacgcaacgtgtgtaat
caccctaaattggtgttgaaacaacaacatccgttatatcaaacggtatgtgacatgttg
aagcagcaacaaaatactctggcggacatcgagcacagcgccaagttgcctgctctcaag
caactgttgctggattgcggcatcggacagcaggcgcgtaattcctccgccgtcacagaa
aactctcaggagcagcagttggtcagccagcatcgcgctctaattttctgccagctgaag
gcgatgctggatatcgtggagaacgatttgctgcgcgcgcatttgccgacggtcacttac
ctacgtctcgacggtagcataccagcggctcagaggcactccgtcgtggcgcgcttcaac
gccgatccgtcgatcgacgttcttctgctgaccactcaggtcggcggtatcggattgaac
ctaacgggcgccgacaccgtcatattcgtggagcacgactggaacccgatgaaagatctc
caagcgatggaccgcgcgcatcgtataggtcagaagaaagtagtgaatgtgtaccgcttg
atcagcagatcgacagtggaggagaaaatcatggggctgcagaagtttaagcttctcacc
gcgaacacagtaatatcgacggacaacgccgctctggagaccatggctaccgatcagttg
ttagatttattcttgttggataacgaaaaagagaagaggcaaccggatcatcacgatgac
gccgctttgtcgaagttacctggcctaccgggaattagccgttctgtactggatatcctg
cctgagctttgggaacagcaacaatatgacgacgaatacgatctcgactcatttttgtcc
acactgaaggctgatagccagtaa
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