Linepithema humile (Argentine ant): 105677493
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Entry
105677493 CDS
T04898
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03430
Mismatch repair
lhu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105677493 (Pms2)
03460 Fanconi anemia pathway
105677493 (Pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105677493 (Pms2)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105677493 (Pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
105677493
NCBI-ProteinID:
XP_012231577
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Position
5:7383000..7385843
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AA seq
676 aa
AA seq
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MNETMEDPVATTEKSKKIEAINKETIHHICSGQVVLDLAIAVKELVENSLDSNATVIDVK
LTDYGKTCISVSDNGTGILEQDFEALSLKHHTSKLREFTDLTEVNTFGFRGEALSSLCAL
SELSIVTKHSLSQHGFKLDFDKNGILTKKEPCAREKGTTVHVRNIFKNLPVRAKEFQKNL
KKEYARTIQVLYSYCLVSTNIKITCFNLIAGKSPNLVVATRNTDSILDNVNSVFGKKSID
GIVKIELQPPDETALQEYNLPNDATIDFDWECYVSTCDHAVGRSSPDRQFFYVNGRPCDL
TKVSRLINNVYHKYNNKQYPFVFLNIKLNRQCADVNVTPDKRTIFFTQERLILTTLKFNL
TTRWDKLQGNFAAKSLTELNFSLKRTGSPNYASPPAKKLQISPSMSHIAKDDVIKISIKS
MKKTVDTKMVINLAIIKEKFREKENIVRTSANTEKRIKYRVQMEANQGEAEKELQRELTK
DSFDKMEVIGQFNLGFIIARLENDLFIIDQHATDEKFRFEKLNNETKLKTQKLIVPKSLN
FSALNETILIEHQQTFEDNGFTFSINEQAEPGKKIELVGMPVSGNWQFGQEDIEELAFLI
REAGNENKEKHIYRPSRVSQMLASRACRSAIMIGTALNTNEMQRLIMQMTQMQNPWNCPH
GRPTIRHLLSLLLINK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaacgatggaagatcctgttgcaacaaccgaaaagtcaaaaaagatagaagct
ataaataaagaaacaatccatcatatctgttctggccaggtggtgcttgatcttgcaatc
gctgttaaagagttggtggagaatagtttggacagtaatgctacggtgattgatgtcaaa
cttactgattatggtaaaacatgcatcagtgtcagtgataatggtactggtattttggaa
caggactttgaagctttaagtttgaaacatcatacttccaagcttcgggaattcacggat
ttaactgaagtaaacacatttggctttcgtggtgaagcattaagttcactgtgtgcttta
tctgaattgagtattgtcaccaaacattccttgagccagcatggctttaagttagatttt
gataaaaatggtatacttacgaagaaggaaccgtgtgctagagaaaagggaaccacagta
cacgtgagaaatatattcaaaaatttacctgtaagagcgaaagagtttcaaaagaatttg
aagaaagagtatgcgcgtactatccaagtcttgtatagttactgtctggtttccacaaac
attaagattacgtgtttcaatttgatagcaggcaaatcgcctaatcttgtagtagccacc
agaaatactgacagcatactggataatgtaaattctgtatttggcaaaaagtctatagat
gggattgttaaaatcgaattgcaacctccggacgaaacagcattacaagaatacaatttg
cctaatgatgctactatagattttgactgggaatgttatgtgagcacttgtgatcatgca
gttgggcgttcttcgcccgatcgacaatttttctatgtgaacggtcgaccgtgtgatctc
acgaaagtcagtagattgataaacaatgtgtaccacaaatataataataagcagtatcca
tttgtctttctgaatatcaagttaaatcgacagtgtgccgacgttaacgttactcccgat
aaaagaactatattcttcacgcaagaacgtctcatattaacgacattaaagtttaattta
acaacaagatgggacaaactgcaagggaattttgcagctaaaagtttgacggaattaaat
tttagcttgaagagaacaggctcgcctaattatgcgtccccgccagctaaaaaattgcaa
atatcaccttcaatgtcgcatatagcaaaagatgatgttattaaaattagtattaaatca
atgaaaaaaactgtggatacaaaaatggtgataaatctagcaataataaaagaaaaattt
agagaaaaagaaaatattgttaggacatctgccaatacagagaaaagaataaaatataga
gtgcaaatggaagctaatcaaggtgaagctgaaaaggaattgcaaagagaattgacaaaa
gattcgtttgataagatggaggtaataggtcagtttaatcttggtttcataatagctcgc
ctggagaatgatctctttatcattgatcaacatgctactgacgaaaaatttcgcttcgag
aaacttaacaacgaaacgaaattaaaaacccaaaagcttattgtgccaaagtcgctaaac
ttttctgcactaaatgaaacgatacttatagaacatcaacaaacattcgaagataatgga
tttactttcagtatcaatgaacaagctgaacctggaaaaaagatagaattagtgggaatg
cctgttagcggtaattggcagtttggtcaagaggacatagaagaattagcatttctcatt
agagaagcaggcaacgaaaacaaagagaagcatatatatcgtccgagtcgtgtcagtcaa
atgttagcatccagagcatgtcgcagcgcaattatgattggcacagctttaaatactaat
gaaatgcagaggctaataatgcaaatgacgcaaatgcagaatccatggaattgtccgcat
ggaaggcccaccataagacacttgttgtctttattgctaataaataaatga
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