Linepithema humile (Argentine ant): 105677541
Help
Entry
105677541 CDS
T04898
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhu03009
]
105677541
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105677541
Ribosome biogenesis [BR:
lhu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105677541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105677541
NCBI-ProteinID:
XP_012231661
LinkDB
All DBs
Position
2:complement(2381679..2385354)
Genome browser
AA seq
776 aa
AA seq
DB search
MTDNDLVGFADPNAVSDNDEDKEITNMKKKVPKKSGGFQSMALSFPVLKGILKRGYKLPT
PIQRKTIPLALEGRDVVAMARTGSGKTACFLIPLFEKLKARQAKTGARALILSPTRELAL
QTLKFTKELGKFTGLQPAVVLGGDSMDNQFGAIHGNPDIIVATPGRFLHICVEMDLQLKN
VEYVVFDEADRLFEMGFGEQIHEIVNRLPESRQTLLFSATLPKVLVDFAKAGLSDPILLR
LDVESKLPEELTLSFITCRPEEKLAVLLCLLKRIIKSDSQIIIFAETLHHVEYIHQILDK
AGISNTFIYSNLDPSARKINAAKFQTGKARVLVVTDVAARGIDIPHLDYVINFNFPAKSK
LFVHRVGRCARAGRTGTAYNIVSTDEYPYLLDLHLFLGRPLTIMPTTGSIENAESAVGKM
PQTMIEEELAELINWHNTSTDLTNMQKVCSNAYQQYIRSRPNASVESNRRTKELRINEAG
VLPQYSNVPSATVDLISRMKNYRPPGTVFEIGTKTNSTDYQAMKTKRTFHKENILNFHKK
LEKRETDKINAASELPQKVDLPSSNAEEINATFRRVIVPKKKSSDELYKISKKKRRVVKR
DEEYYIPYSASDKYTEDGLAVNTFATEADKAQMDLTADTEEGRHLQTQLKKWDRKKKKMV
TIDKDPKAKKIRTESGVWIPATYKTNRYSMWKEKSKINEDVSEDDSEEESPQMQNLRTAA
NTHWARHNQKLKEKVKTKNELKRPEQILKARKLLESKRRRHGGKRNKSQKNNKRKR
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaatgatcttgttggattcgctgacccaaatgcggtcagcgataatgatgaa
gataaagaaattactaacatgaagaagaaagtgccaaagaaatccggaggatttcaatct
atggctttgagttttccagtattaaaaggaatcctcaaaaggggctataaattgccaaca
cctatacaaagaaaaactataccattggctctcgagggaagagatgtggtagcaatggct
agaacaggtagtgggaaaactgcttgctttctaatacctttgtttgaaaaactaaaggca
agacaagcaaaaactggtgcacgtgccttgatattatcacccacgcgtgaattagcattg
cagacactaaaattcacaaaggaattggggaaattcacaggattacagccagcagtggta
ctgggtggtgatagtatggataatcagttcggtgcgattcatggaaatcctgatatcatt
gtagccactccaggcagatttttgcatatatgtgtagaaatggatctgcaattgaaaaat
gttgaatatgttgtttttgatgaagctgatagattatttgagatgggttttggagaacaa
atacacgaaattgtaaacagattaccagaatcacgtcaaacactcttgttctctgctact
ttgcctaaagtcttagtagattttgcaaaagctggtctaagcgatcccattctacttcgt
ttggatgttgaaagtaaactgcctgaagagctgacgttatcgtttattacgtgtcgtcct
gaagagaaattggctgtacttttatgtctgttaaaaaggattatcaagtctgattcacaa
ataattatatttgcagaaactttgcatcatgtagagtatattcatcagattttggataaa
gcaggtatctctaatactttcatttactcgaatctggatccttccgcgcgtaaaataaac
gcagcaaaatttcaaactggcaaagcaagagttctcgtagtgacggatgttgctgctaga
ggaatagatataccacatttagattatgtgattaatttcaattttcccgcaaaatctaaa
ctctttgtacacagagtaggacgatgtgcgcgagctggacgtactggaacggcatataat
atcgtgagcacagatgaatatccttatctcctagatttacatctctttcttggccgacct
ttgacgataatgccaactacaggatccattgaaaatgcagagtctgctgtaggaaaaatg
ccacaaaccatgatagaagaggaactggcggagctaataaattggcataacacatctacg
gatcttacaaatatgcaaaaagtgtgcagcaacgcttatcaacaatacatcaggtcacga
ccaaacgcttcggtagaaagtaacagaagaaccaaagaacttcgcataaacgaagccgga
gttctacctcaatattctaatgttccttctgcaactgtagatctaatatcaaggatgaaa
aattacagaccgccgggaacggtatttgagattggtacgaaaacaaattcaaccgactac
caggcgatgaagacgaaacgaacgtttcataaggagaatatccttaattttcacaaaaag
ctggaaaaacgtgaaaccgataaaattaatgcagcatcagaattgcctcaaaaagttgat
ctgccatccagtaatgctgaagaaattaatgctacatttaggagagtgatagttccaaag
aagaagagtagtgatgagctatataaaatttcaaagaagaaaagacgtgtagtgaaacgg
gatgaagaatattatataccttattccgcatcagacaaatatacggaagatggtttggcg
gttaacacatttgccacagaagctgataaagcacagatggatttaacggcagacactgaa
gagggccgacatcttcagacccaattaaaaaaatgggaccgaaagaagaagaaaatggtt
accatcgataaggatccgaaagcgaaaaaaatacgtaccgaatcgggtgtatggatacct
gctacgtataaaacaaatcgctacagcatgtggaaagagaagtctaaaattaatgaagat
gttagcgaagacgatagtgaagaagaatctccacaaatgcaaaatttgcggaccgcagca
aacacgcactgggcgcggcacaaccagaagcttaaagaaaaagtaaaaacaaagaacgag
ctgaagagacccgagcaaatcttaaaagcgcgcaagctgcttgagagcaagcgcagaaga
catggcggaaaaagaaataaaagtcagaagaataataaacggaaacgttaa
DBGET
integrated database retrieval system
