Linepithema humile (Argentine ant): 105677562
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Entry
105677562 CDS
T04898
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105677562 (Gapvd1)
Membrane trafficking [BR:
lhu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105677562 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RasGAP
DUF5601
Motif
Other DBs
NCBI-GeneID:
105677562
NCBI-ProteinID:
XP_012231692
LinkDB
All DBs
Position
2:complement(2585062..2592734)
Genome browser
AA seq
1535 aa
AA seq
DB search
MSSINSIDSHGTLQWDMMELARHLRQERLFVNSEQQNLQTLNKRVLHISSELAQQAWVTA
QQRVNLNRLIVARPDCTPASCCLKANALENSHFIDAHKYLRYQACLSYGEFLGALRKSPK
LLASCLVEGDKVIPDSMQMIVQCLAAGLYGSCILPEDKSLVLQLLRHLMLLQIIPSDNPR
RLLSHGTFSRFYSIFHESLFSAKLFLTAALHNPIVQLLMEDEMYLDIDPDKMPIRYPAAE
RLKKFGKEGTPEYQAKLQRYRLWTINSLHRITQRFIVNIRETMHCFPTSVSWLVRQIAGL
FTKNGNVDPKEVHAMCTDLVFTYFICPAIVNPEPYGITDAPIGQVARFNLMQVGQILQML
SLQKYQSVDNKVIDLYKKFEKDSVSSIIDSMLDGATEELEEEPTIIDNNKLQGLSRSAAL
FTEGELDTLIMFLNTVIGDSNGEAISHNTFDRKQLAEMLSQLPSGSLHNNKSNNEYLETP
TKRGVVGKGKGRIRMTASFSPNATNEGGEEINSTAAPEEETLDKNSQDVLVIPFGPTIGE
SVGLLSEQKVLCMELQSRMENGPVTLNLPDDASVEHTRQENGNVERIETQEKRTRFSLSH
DEVLFEGSIGNTSDNLEAVSEAASNHSVASSLELETEDQNDNLSDMVSANVSGRGTPNIS
GRDTPSSQITEGDDGRVAGEVRQLDLPPPNIPTKQSRSEIDDKFCKFEIKKLIEGDETVS
MVSDTWSTDVLASDSEIVEQQDRILLPVPPEQVAPVLPVEPTPNMLDISETASEAWSTDV
LASDSERLTEVDTDDTASVARSDDTARSEIEIESRADSEGNEETLQSATPCTDGSGINFS
SVSGIRDDAGSGGGSVGSSVAVHLSPTTSPLPSSSNVTGRGGTKSDYRRSTMEYVDKNAN
NINNTDYSKPLREDRLVHLIDKLQIDNDKQAERQATAHNHIAAAAVAPALLLANHISAPV
LPEKSQNGNVKAEELDGCMASVGDTVGRLSTASLTSSSSSGSEPRMKGNNSTSDLPLPTP
TVNGNCDTTDGSTTNFSKPNASTGAIPKSISFDMTAERGDKELLDDDQKNKRSFFGKLKL
SLRNRRGKTFRGTDERCYDREAGGDGVDICSRHRLRRIMSEDVTASSNIAGDTTDDILAK
YRRKPSAASDTASVESNQSRTKEVEDERLSIDPNNVELSYAFADAKRKLRMVLSTADLQH
IPWNTSERHCWSQKENELVAFLQLQLAEAINLQDRSLIAHLHETLRCVRLFNDDGCRKLF
KSLREDYQKRSPYIAYLIRCRQGLLSTLAHLDRLCERVKCDRDAINNHLVSVCVRVFLEK
REAFLLRFCDEFKKLTLTDEKQDLVDNFLGKIHAEMDNDPIWQSASANQLDLARVVVERT
VMARVYHNALYPNGDGDVYRDQLLHDHIKKLAKVITPNHKDLRIPKVYHYECPWPWAQAE
LAVISAYKTPRDKLQCVFRCATTIMNLLSMASERGIPAADDLIPVLVYVIIKTNPPSLLS
TVQYVDSFYGNRLEGEEQYWWTQFCSAIEFIKTMD
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccataaacagtattgattcccacgggacgctacagtgggacatgatggaatta
gcccgtcatttgcggcaagagagactgtttgttaattcagaacagcagaatttacaaaca
cttaacaagcgagtcttgcatatatcgtcggaattagcgcagcaagcatgggtaactgct
caacagagagtgaatctgaatcgtttgatagtagcaaggccagattgcactccagcctcg
tgttgcctaaaagcgaacgcgttggaaaattcgcatttcatcgatgcacataagtacctg
cggtatcaagcatgcttgtcttatggagaatttttgggcgcattgcgaaaatcacccaag
ctgctcgcttcgtgtctggtcgaaggagacaaagtcattccggactcaatgcagatgatt
gtacagtgcttagctgctggcttatacggcagctgtatattaccggaagataaaagcttg
gtgctccaattgcttaggcatcttatgctgctgcagataattccgtctgacaacccacga
agattgctcagccatggcacgttctccagattctactcgatctttcacgagagtctgttt
tccgcaaagctcttcctgactgcggctctgcataaccctatcgtgcaattgctcatggag
gatgaaatgtacctggacatcgatccggacaaaatgcctatcagatatccagctgcggaa
agattgaagaaattcgggaaagaaggcacgcctgagtatcaagcgaagttacagcgttac
agattatggacgatcaattctctgcatcgcatcacgcagagattcatcgtcaacattcgc
gaaacgatgcactgctttcccacgagcgtttcctggctagtaagacaaatcgcaggactt
ttcaccaagaacggcaatgtcgatccgaaagaagtgcacgccatgtgcaccgatcttgta
ttcacatacttcatctgtcctgctatagtcaatccggagccgtacggtatcaccgacgcg
ccgataggccaggtcgcgcgatttaatctcatgcaggtcggacaaattttgcagatgctc
tcgctgcagaagtatcaaagtgttgataataaagttatcgatctgtacaagaaattcgag
aaggattcggtgtcttccataatagattcgatgttggacggcgcaacggaggaattggaa
gaggagccaacaatcattgacaataataaacttcaaggcctgtcacgatccgcagcactc
tttacagaaggtgaactggataccttaattatgtttttgaatactgtcatcggtgacagc
aacggagaagcaatatcgcataatacattcgataggaagcaattagcggagatgctgtcg
caattgccctcaggttcactgcataataataagtcgaacaacgagtatttggaaacacct
actaaacgaggtgttgttgggaaagggaaaggacgtataaggatgaccgcatcattctca
ccaaacgcgacaaatgaaggtggagaggaaattaatagcactgctgctcctgaagaggaa
actttggataagaattctcaagatgtgttagtgatacctttcggcccaacaatcggagag
tctgtaggactgttgagtgaacagaaagttttatgtatggagctccagagtcgcatggaa
aatggaccagttactttgaatctcccggacgatgcgtctgtcgaacacactcgacaggag
aatggcaacgttgaacgcattgaaacgcaagaaaaacgaacgcgtttctcattgtcacat
gatgaagtactgttcgaagggtcaattggcaatacgtccgataatttggaagctgtgtca
gaagctgcttccaatcacagcgtcgcttcgtccctggaattagagacagaagatcaaaat
gataatctgtcagacatggtgtctgctaatgtgtcgggacgaggaactcctaatatatca
ggacgagatacaccgtcgtcccaaatcactgaaggagacgatggacgcgttgcgggtgaa
gtaaggcagttggacttgccgccgcctaatattccgactaagcagagtaggtctgaaatt
gacgacaagttttgtaaatttgagatcaaaaagctcattgaaggggacgagactgtttct
atggtatccgatacttggtctacagatgtactggcctcagatagcgaaatagttgaacaa
caagatcgaatactgctccctgttccgcccgagcaagtcgcgcctgttctgccggtcgag
cctacgccgaatatgttagacattagtgaaaccgcctctgaagcctggagcacggatgtg
ctggctagtgattcggaaagattgaccgaagtcgatacggatgacactgctagtgttgct
agatctgacgatactgctaggtccgagattgagatagagagtcgcgctgattccgagggt
aacgaggaaacgcttcagtccgccactccatgtacagacggctcgggcatcaatttttcg
tccgtttctgggattcgagatgatgctggaagcggagggggaagcgtgggatcgtcggta
gcggttcatttatcaccgactacgtcaccgttaccgtcgtcatccaacgtaacgggtcgc
gggggaaccaagtccgattaccgacgcagcacaatggaatacgtagataaaaatgcgaac
aatataaacaatacagattacagcaagccgttacgcgaggacagactggtccacttgata
gataagcttcaaattgacaacgataagcaagccgagcgtcaggcaactgcgcacaatcac
atcgctgcggctgcggtcgcaccggcgttgctgctggctaatcatatttccgcgcctgtt
ctgccggagaagtcgcaaaacggtaacgtgaaggcagaggaattggacggctgcatggcg
tcggttggggatactgttggccgacttagcacggctagcttaacatccagcagcagttcc
ggatcggagccgcgaatgaagggcaacaattcgacgtcggatttgccgttgccaacgccg
acggttaacggcaactgcgatacaacagatgggtcgaccaccaacttttccaagccgaac
gcatccacgggtgccattccgaaaagcataagtttcgacatgacggccgagcgcggcgat
aaggaattgttggacgacgatcagaagaacaaacgcagtttctttggcaagctgaagctg
tcgctgagaaatcgcagaggcaaaacgtttcgtggaacggacgagaggtgctacgatcga
gaagccggtggcgacggcgtcgatatatgcagcaggcacagattgcgcaggatcatgtcg
gaagatgtaacagcatctagtaacattgcaggcgacaccaccgatgacatattagcaaag
tacaggaggaaaccaagtgcggccagtgacacagcctcggtcgaaagcaaccagtctcgc
acaaaagaggtggaagacgaaaggctgtcgatcgatccgaataatgtagagctgtcctac
gctttcgcggacgctaagagaaaattacgtatggtacttagcactgctgacctccaacac
attccatggaatacttctgagagacactgttggtcgcagaaggagaacgaactggtcgcg
tttttgcagctgcagttggcggaggctataaacttgcaggatagatcgttaatagctcat
cttcatgaaactttacgttgcgtgcgcctatttaatgacgacggctgtagaaagctcttc
aagtctctgcgggaagattatcaaaagcgatcaccttatatcgcgtatttaatcagatgt
cgccaaggattgctgtcaacattggctcacttagataggttgtgcgagcgagtcaagtgc
gaccgggatgccatcaataaccatctcgtgtccgtttgcgtgcgagtattcttggaaaag
agggaggcttttctcttgcgcttctgcgacgaatttaagaaactcacgctgaccgacgag
aagcaagatcttgtcgataattttctgggaaaaatccacgccgagatggacaacgatcca
atctggcaatcggcgagcgctaatcagttggacctggcgagagtcgtggtggaaaggacc
gtgatggcacgggtgtaccataatgcgctctacccgaacggagatggggatgtgtacagg
gaccagcttcttcacgatcacatcaaaaagttggcgaaggtcataactccgaatcacaag
gacctacgcattccgaaggtttatcattacgaatgcccctggccatgggcgcaggctgaa
ttggctgtgatatcggcgtataaaactcctagggacaaactgcagtgtgtgtttcgttgc
gcgaccaccatcatgaatctcctctccatggcgtcggaaaggggaattcccgccgccgac
gacctgattcctgtgctagtctacgtcataatcaagaccaatccgccgtcattgctatcg
actgtccaatacgtagacagcttctatgggaatcgactggagggcgaggaacagtactgg
tggacgcagttctgctctgcgatcgagttcatcaaaacaatggattaa
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integrated database retrieval system
