Linepithema humile (Argentine ant): 105677664
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Entry
105677664 CDS
T04898
Symbol
Gnf1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03030
DNA replication
lhu03410
Base excision repair
lhu03420
Nucleotide excision repair
lhu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105677664 (Gnf1)
03410 Base excision repair
105677664 (Gnf1)
03420 Nucleotide excision repair
105677664 (Gnf1)
03430 Mismatch repair
105677664 (Gnf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhu03032
]
105677664 (Gnf1)
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105677664 (Gnf1)
DNA replication proteins [BR:
lhu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105677664 (Gnf1)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105677664 (Gnf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
AAA
BRCT
RuvB_N
AAA_30
Rad17
AAA_5
AAA_22
AAA_14
RNA_helicase
AAA_17
AAA_16
BRCT_2
AAA_33
AAA_assoc_2
AAA_18
NTPase_1
nSTAND3
Sigma54_activ_2
AAA_6
Viral_helicase1
DUF3847
AAA_19
PTCB-BRCT
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105677664
NCBI-ProteinID:
XP_012231846
LinkDB
All DBs
Position
4:complement(6900656..6905362)
Genome browser
AA seq
1026 aa
AA seq
DB search
MPRDIRSYFTPVATSQKKKSEPVVSKPQKRRVILSDDEDEEESKSSARKRSKVVRKTKKV
SALSDSEDEVIILDNKKESKASKKNVNEKPRKEIAPGELFGKKPITRVEETKVSRKLHKV
ESEFHDDDAFDAVLEQLDSQSTATQNTIKDKNDIKNTDIPKHSKKDADSNKNKKDDTDSK
YFHNDTNKKNKIETKEVKKSPRKNNHNATKITSPTKQKLQKKKNNSFSSNEDLSTNDEYS
NNKSNSKKINLKDVSTSNKDEDTKEQSQDKKKAKTVDLFEERIQKKKERVAMYEKYLQRG
GARNPGSKEIPSGAKNCLAGVTFLITGVLDSLEREEAEDLIQQYGGRTVNAVSGKVNYII
VGDEAGPSKLIKASSLGIKQISEDDLLQMIRTRPEGRSEDIKPTKTRAKSKTSNKSESDK
SPSPKKAKTPSPKKAETPSPKKAETPSRSPVKVKMSSPMKQASDTSSTSESQEISVGSQP
LVEKYRPKTLKQIVGQQGDKSCAHNLYVWLRDWHKNRQDPKVKNGTNKQTHGQSFKAALL
SGPPGVGKTTTAQVVCKELGYDLVEFNASDTRNKTLLKEEVSGLLSNTTMKDYLTGAKQK
ITSKHVLLMDEVDGMAGNEDRGGLQELVGLIKCTEVPVICICNDRYNAKVKTISIHSYDL
KFSKLRVEQIRSSMLSLCYKENIKIAKEDLDRLIESTNHDIRQVINHLEFLSGQKARVEA
TERKHSNKDFKLGPFDVAKMVFSAEQQKNMSLNDKIGLYFHDYNIAPLFVQENYLAVRLS
QVSPQQRLDKIARAADSISQADLIEKMMRSNMMWSLLPMHAYFSFVVPGSEMSGSLDAMV
RFPSWFGRNSKAMRFNRLMQELTTHTRLVTGANKDALNMDYLVHIRNAVTKPLIDNGADG
IEAAISVMGKYHLTREDLDSIIEISLWPGVRDPTSSLDSKVKAAFTRAYQKNPPMLPYAI
NSNATAKKRSAQDDNFVEEEDDEEEDDNIDSDKMIKAKKPTSKAAASTKASGEPAKKRAK
GRGKAK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgccacgggatataagatcttattttacgccggttgcaacctctcagaagaagaaaagt
gagcctgtcgtttcgaagcctcaaaaaagacgtgtgatcttgtcggatgatgaggatgaa
gaggaatcaaagtcatctgctcgaaaacgctcgaaggttgtgcgaaaaacaaagaaggtt
tctgccctctctgactcagaagatgaggtgattatattagacaataagaaagagtctaaa
gcaagtaagaaaaatgtgaatgaaaagccacgcaaagaaattgctcctggtgaactgttt
ggcaagaaaccaataacgagagtagaagagacaaaagtcagccggaaattacataaagtg
gaatctgaatttcatgatgatgatgcttttgatgctgtacttgaacaattggattctcag
agtacagcaacgcagaacacaataaaagataaaaatgacattaaaaatacagatattccc
aagcattctaaaaaagatgcagattctaataagaacaaaaaagatgatactgattcaaaa
tattttcataatgatacaaataaaaagaataaaatagaaactaaggaagtaaaaaaatct
cccaggaagaataaccacaatgcaacaaaaattacatctcctacaaaacagaaattgcaa
aagaagaaaaacaatagttttagttcgaatgaagacttaagtacaaatgacgaatacagt
aataacaaatcaaatagcaaaaagataaatttgaaggatgtctcaacatcaaataaagat
gaagatacaaaagaacaatcacaagacaaaaagaaagccaaaacagtggatttatttgaa
gagaggatacaaaagaagaaagagcgcgttgcaatgtatgaaaaatatcttcagagaggt
ggcgccagaaatcctggctctaaagaaattccatcaggtgctaaaaattgtttagccggc
gtgactttcttgattaccggtgttttggattccttggaaagagaagaagctgaagatttg
attcaacaatatggtggtcgtactgtgaatgctgtatcgggcaaagttaattatattata
gtgggagatgaggctggcccgagcaaattgataaaggccagtagtttaggcatcaagcag
atatctgaagacgatctcctacaaatgattcgcacgagaccggaaggtagatctgaagat
atcaagccaactaaaacaagagcaaaatcgaaaacatcgaataaatctgaaagcgataaa
tcgccatcgccgaaaaaagcaaaaacgccatcgccgaagaaagcagaaacgccatcgccg
aagaaagcagaaacgccatcacgttcaccagtaaaggtgaaaatgtcgtcgccgatgaaa
caagcttcagacacaagcagtacgagtgaatcgcaggagataagtgtcggatcgcaaccg
ctagttgaaaaatacagacccaagaccttgaagcagattgtcggtcagcaaggagacaag
agttgcgcgcataacttgtacgtgtggttgcgcgattggcataaaaatcgccaggatcca
aaagtcaaaaacggcaccaacaagcaaacccatggacaaagttttaaagctgccttgctg
tccggcccgcctggcgttggcaaaaccacaactgcgcaggttgtttgcaaagaattggga
tacgatcttgtggagttcaatgcttccgacaccaggaacaagacgcttctgaaagaagaa
gtctcgggattgctatccaacaccacgatgaaggactatctcacgggtgctaaacaaaag
attacgagtaagcacgtgctgttgatggacgaagtcgacggcatggccgggaacgaggat
cgcggcggcttacaggagctagtcggtttgatcaaatgcacggaagtgcctgttatctgc
atatgcaacgaccgatacaacgcgaaggtgaagaccatttcgattcacagctacgatctg
aaattctcgaagctcagggtggagcagatcaggagttccatgttgtcgctgtgctacaaa
gagaacatcaagatcgcaaaggaggacctcgaccgcttgatcgaatcgacgaatcacgat
atccgacaagtgataaatcatctcgagttcctcagcggtcaaaaggctcgggtcgaagcg
accgagaggaaacactcgaacaaggacttcaagctgggtccgttcgacgtcgccaaaatg
gtattcagcgccgagcaacagaagaacatgagtctgaacgataagatcggtttatatttc
cacgactacaatatagcgcctcttttcgtgcaagaaaattacctggcggtcagattgtcc
caggtgtcgccgcagcagaggctggacaagattgcccgcgcggccgacagcatatcccaa
gcagacctcatcgagaagatgatgagaagcaatatgatgtggagtctgcttccaatgcat
gcttatttctccttcgtcgtgcctggtagcgaaatgtcgggaagcctcgatgcgatggtg
cgatttccgagctggttcgggcgaaattccaaggcaatgagatttaatagattaatgcaa
gagttaacgacgcatacgcgattggttacgggcgcgaacaaagacgccctgaatatggat
tacctggttcacattcgaaacgccgtcacaaagcctctgatagacaacggcgcggacggt
atagaagctgcgataagcgtcatgggaaagtatcatttaacgagggaggacttggattcg
ataatcgaaatctctctctggccaggagttcgcgatcctacaagcagccttgatagtaaa
gtgaaagcagcattcacgcgcgcgtatcagaaaaatccgcctatgttgccgtacgcgatt
aatagtaatgcgacggcaaagaaaaggtctgcgcaggacgacaatttcgtggaagaggaa
gatgatgaagaggaggacgacaacattgattccgacaagatgatcaaggcgaagaaacct
accagcaaagctgctgcctcaacgaaggcaagcggcgaaccagctaaaaagcgcgcaaaa
ggacgcggtaaagcgaagtag
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