Linepithema humile (Argentine ant): 105677781
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Entry
105677781 CDS
T04898
Symbol
Vps16A
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04140
Autophagy - animal
lhu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105677781 (Vps16A)
04148 Efferocytosis
105677781 (Vps16A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lhu04131
]
105677781 (Vps16A)
Membrane trafficking [BR:
lhu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105677781 (Vps16A)
Hops complex
105677781 (Vps16A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
PEP5_VPS11_N
PipB2_N
Motif
Other DBs
NCBI-GeneID:
105677781
NCBI-ProteinID:
XP_012232056
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Position
4:7490342..7494446
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AA seq
831 aa
AA seq
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MSAMLTADWFPLGRDVYFRKFELYPISFQHEISSNNWVVAAPYGGSIAVTRNPKKLVKVQ
GAIKPLIMLYTSSGKLTAKLQWSSGQLITFGWSQQEELLCVQDDGMVLIYDMFGTYQHTF
SMGNAAKDTKVVDAKFFTTSNSTGIAVLTSTNRIFLVNNTSEPKVRPITDMPRHGGQIDC
WCMVHCDRETQVILSNKEGIFVIHQSHQNTFPFSNLFNNKISNVVAIVVSANNRHVALYA
DTGHLYIGSIDFKEKYCECYTNIKEPLADIAWCGTEAVVCSWSSTIMVIGRTAETIVYNY
DDPVHLVTEIDGVRVLSSCSHEMIQKVPHVVQRIFGINSTDPASYLLEASKQFQKKSHKA
DSYIDLVKDKLDSAIKACIDGASHEFDFETQKILMRAAKFGKGFSKTIDSDYYVQMCRTL
RVLNAVRHPAVGIPLTYTQFNVLTNQVLLDRLVARRHYYLSIQIARHLQLPEIDGESRIL
AHWACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIAKRAADCGRKQLAIKLIDYEPRA
HQQVPLLLTLGEERAALLKAVDSGNTDLVYTVILHLRENMTLGDFQMSIMHCPLAMALYI
KYCQSHNRETLRDIYNQYDDFHSQAVWFITESYQRKNTMSRDALLQSAQENFKLARNDTN
ASLTEEQIKLLKYQRSLEDTLHESVVGKPLHETVKVLLLRNELKLADKLRSEYKIPDRRY
WWLRIQCLAEQGLWSDLEKFSKSKKSPIGYEPFIDECLKYNEKLEARKYLAKVRDDLKVK
YLVKLTMLSEAAQTAFDQKDTSALTFVLAQCGSSDKQLVDKINMYLGALKN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgatgttaaccgccgattggtttcctctcggacgagatgtgtactttcgaaaa
tttgagctctacccgatatccttccagcacgagatttccagcaacaattgggtggtggct
gctccttatggaggttccattgccgtcacgagaaaccctaagaagcttgtcaaagttcag
ggtgctatcaagcctttaataatgttgtacacatcgtcggggaaattgacagctaaactg
caatggagcagtggacaactaataacattcggctggtcccaacaagaggaattgttgtgc
gtacaagacgatggcatggttcttatatacgacatgtttggaacttatcagcatactttc
agcatgggaaatgcagcaaaggataccaaagttgttgacgccaagttcttcacaacatca
aacagcactgggatagctgtcttgacgtccaccaatcgtatatttcttgtgaacaacaca
tctgagccaaaagtccgaccaattactgacatgcccagacacggtggtcaaattgattgc
tggtgcatggtacactgtgatagggagacccaagtgattttgtcaaacaaggaaggaata
tttgttattcatcaatctcatcagaacacatttccatttagcaacctcttcaacaacaag
atcagtaatgtggtagcgatagttgtgtcggctaacaaccgacacgttgcgctttatgcc
gacactggacacttgtacatcggttcgatagacttcaaggagaaatattgcgagtgctat
acaaatattaaagaacctttggcagatatagcctggtgtggcacagaagccgtggtgtgc
agctggagcagtacgataatggtgataggacgtacagccgagactatagtgtacaattac
gacgatcctgtgcacctggtcactgaaatcgatggagtgcgcgtattgtcgagctgctct
cacgaaatgatacagaaagtaccgcacgtcgtgcaaaggatattcggaatcaactcgact
gatcctgcttcctatctcctggaggcctccaagcagttccagaagaagagtcataaggct
gacagttatatagatttagttaaagataaattagactcggcgataaaagcgtgcatcgat
ggagcgagccacgaattcgactttgagacgcaaaagattttaatgagagctgcaaagttt
ggaaaaggattcagcaagacgatagactcggattattatgttcaaatgtgcaggactctg
agggttttgaatgcggtgcgacatcccgctgtgggcattccgttaacttatacgcaattt
aacgttctcacgaatcaagtgctgctagacagattagtcgcgcggaggcactattattta
agcatacagatagcacgccacttgcaattgcccgagatcgacggggaaagtaggatattg
gcgcactgggcgtgctacaaggtgaaacagacgcaattagacaaggagcaaatagcggag
gagatagctgacaaattaggatatgctcctggtgtttcgtacagcgaaatcgcgaaacga
gcggcggattgtggtcgaaaacagctggccattaaattaatcgactacgagccacgcgcg
catcaacaagtgccgttgctgttgacgctcggcgaagagcgagccgccctgctcaaagct
gtggacagcggcaacacggatctggtctacactgtcattcttcatcttcgagagaacatg
actctcggggactttcaaatgtctataatgcactgtcctctagcgatggcattatatatc
aagtactgccagagccacaacagagagacattgcgcgatatttacaatcagtacgacgac
ttccattcgcaagcggtttggtttatcacagagagttatcagcgaaagaacacgatgtcg
agggacgcgttgctgcaatctgcccaagaaaactttaaactggctcggaacgacaccaac
gcttcgctgacagaagagcagataaaactcttgaagtatcagagatctttggaagatacg
ctgcacgagtcagtcgtgggaaagcctctgcacgaaactgtgaaagttctattattgcgt
aacgagttgaaattagcggataaattgcgatcggaatataaaataccggaccggagatat
tggtggttgagaatacaatgtttagcagaacaaggtctgtggagcgatttggagaaattt
tcgaagagcaaaaagtccccaattggctacgagccgtttatagatgaatgtctaaaatac
aatgaaaagttggaagctaggaagtatttagccaaagttcgagacgacctcaaagtgaaa
tatctagtgaaattaactatgctgagcgaagcggcgcaaacagcgtttgatcaaaaggac
acttcggccctcacatttgtgcttgcacagtgcggatcgtcggacaaacaattggtggac
aagatcaacatgtatctaggcgctcttaaaaattaa
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