Linepithema humile (Argentine ant): 105678154
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Entry
105678154 CDS
T04898
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhu03016
]
105678154
Enzymes [BR:
lhu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
105678154
Transfer RNA biogenesis [BR:
lhu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
105678154
Prokaryotic type
Methylthiotransferases
105678154
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
DUF2130
Motif
Other DBs
NCBI-GeneID:
105678154
NCBI-ProteinID:
XP_012232674
LinkDB
All DBs
Position
1:complement(44003917..44006353)
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AA seq
546 aa
AA seq
DB search
MPIPCEDIIEDIEDLISSQDITPKERYNSRKYITIRPKQKQRLQEEVLDPPILSSIIPGT
QMIYVKTWGCTHNTSDTEYMAGQLAAYGYNLTDDKHKADLWLLNSCTVKNPAEALFRNEI
KHGKKMGKHVVVAGCVPQAAHKSNFLEGLSVIGVQQIDRVVEVVEETLKGNTVRFLQQKK
DSDKKKIGGALLSLPKVRRNPLIEIIAINTGCLNQCTYCKTKHARGDLGSYPPEEIVERA
KQAFEEGVCELWLTSEDTGAYGRDIGTSLPELLWQLVDVIPKGCMMRIGMTNPPYILEHL
DEMAKILQHPRVYSFLHIPVQSGSDQVLADMKREYTRAEFEHTVNFLSERVPNLTIATDI
ICGFPTETEADFEETMTLCQKYKFPSLFINQFFSRPGTPAARMPKVPTQEVKMRTKRLSE
FFQSYELHRHKVGSVQKVLVTEVSHDKQYYAGHNKSYEQVLVPKKKQFMGKMIDVRIVAA
TKFCMKGEPIDEGISPALRSPLPQGIVSGVLHKIPHCEMETSRYVIAAMVVIFLAVISRI
LWKFLI
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcctattccttgtgaagacattattgaggacatcgaggatttaatatcgtcgcaagat
ataacgcctaaagaaagatacaattctaggaagtatatcacgatacggccgaaacagaaa
cagcgattacaggaagaagtgctagatcctcctattttgtcaagcataatacccggcacg
cagatgatttacgtaaagacgtggggatgcacgcacaatacttcagacaccgagtacatg
gctggacaattggcagcgtatggttacaatttgactgatgataaacacaaagcagatcta
tggctcttgaattcatgtactgtgaagaaccctgcagaagctctgttcagaaatgaaatt
aaacatggaaagaaaatgggcaaacatgttgtcgtcgctggatgcgtgccacaagctgct
cataaatccaactttctcgaaggattaagtgtaattggagtacaacaaattgatcgagta
gtggaagttgtggaggaaactttgaaaggaaacacagtgaggttcctacaacaaaaaaag
gattccgataaaaagaagataggtggtgctttgctaagtcttccaaaggtgcgacggaat
ccacttattgagatcatagctatcaatactggctgtttgaatcagtgtacttattgtaaa
acgaagcacgcacgaggagacctaggtagttacccaccggaagagatagttgagcgagct
aagcaggccttcgaggagggtgtgtgtgaattgtggcttacatcggaagatacaggcgcc
tatggcagagatattggcactagcctgccagaattattgtggcaactggtcgacgttatt
cccaaaggttgcatgatgcgaatcggcatgaccaatccgccatacattttggagcacttg
gacgagatggccaagatcttgcagcatcctagggtttatagtttcctgcatattccagtg
cagtccggcagcgatcaggtactggccgatatgaaacgggaatacacgcgtgcagagttc
gagcacacagtgaattttctgagcgagcgagtgccgaatttaaccattgctacagatatc
atctgcggcttccctacggaaacggaggcggatttcgaggagacaatgacgctctgtcaa
aaatacaagtttccaagccttttcattaatcagttcttctcccgacctggcacacccgct
gccaggatgccgaaggtgcctacgcaggaggtgaagatgagaaccaagaggttgtctgaa
ttcttccagtcttacgaactgcacaggcataaagtgggatcggttcagaaagtgctggtg
acggaagtatcgcacgataaacaatattatgcgggtcacaataaatcctatgaacaggta
ttggtccctaaaaaaaaacagtttatggggaaaatgattgacgtgaggattgtagcagcg
actaagttttgcatgaaaggggaaccgatcgacgaaggtatatccccggcactgaggtct
cctctaccacaagggattgtttccggagtactgcataaaataccacactgtgagatggaa
acatcgagatatgtaatagcggcgatggtggtaatctttttggctgtaatatctaggata
ttatggaaatttttgatttag
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