Linepithema humile (Argentine ant): 105678196
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Entry
105678196 CDS
T04898
Name
(RefSeq) protein suppressor 2 of zeste-like
KO
K11459
polycomb group RING finger protein 4
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105678196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lhu03036
]
105678196
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
105678196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
105678196
NCBI-ProteinID:
XP_012232753
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Position
1:44273386..44285670
Genome browser
AA seq
1341 aa
AA seq
DB search
MAGLGIGKRTLLRDVNPHLICPLCRGYLIDATTVVECLHSFCRSCILKHLRNVAHCPSCK
HALNKAKPNIKADKALQDIVYKLVPGLYHKEMLKRREFYKKHPEHANSATPEQRGEDVSG
RLIFSPEDVVSLSLEYSTRRMGPWIALKNTDTDANNSNNTNSNNKHNNNNNHDDNTGGNR
RYLQCPALVTVAHLKKFLALKYSVDITRYTIEICHRLAPLPENWTLIDVAYIYPWKRNAP
MRLFYRVAKEQRLEAPSHQRPSTPGLGARDCVPPSNAQESSKSEVKSDSNSNDKSVAKEL
NKKEDEANKTTTTLITTTTNTSPLSTTACKDSNKQIKSPIKILKNPDGKYEVQKSSSATL
GWNEKEQTVVVTDADKNLTNPEFSVVNSNGVKITLKQRSPPQNGNTKKPKIVSNVLLSCS
PPEKILSALQSQQLQNKSKLMSPVSPDKQEKQRRKVTFVDRLPMSEKTSPSTAMPKTALK
KPAEQQEKKQFLQGFQLTAREPTASDDGKVKSPVCDTVAVADKFLQKTNAKAEEFSKKNT
EKSNNENVGSKTNNNTTATNVMRKRVASMMSATNPRVYVSKIDSVDGHTFSAGTNPNSKN
IVSGNHAAKLDVYTFSNDAPILPAGAVKRKCPPGVPIADLKRRKSMPIAPKQSASKKQNT
SPHNSVAKQSHISSAEHVVPTSRAVNIAGDYGGVARVSNVNIAKTSTDPLTSNDTRDFLV
DGYGLNIPASLSITLTSPKSPGTSKQFVEPNDPVDNNRKVALGKVNPTITLNNKSVDPRV
LKALKTGQMKMPSTPPKAKSATMVATMDRNEAANQQRTTGRQKREHESSRDILDLSGGNK
KVEIHPLRIPQPVTKLKTNKNPAPGRNSMQPGGISDQGQVVTLLGGHRYYRSPPGSLTPA
AHRVTDCPLPPVLPRAPVYAPSFCGSINRSNSDLSSVFPSLPSLYALHQAPNLQQFQLDT
VRLRIPESSSNPGISGMPIKSHLAAQCAPIKPARSSVAPLAVPIAKHSSVNKITNANNNC
MGQGNGNNPMDFHSNEGLDSTGEVSQATIQKRFSSNIESTNNKLLSPCKLAKSNDQATVE
IKNKDLSVEARNESNDTDNSMMQQQQQRQQQQHREAASPSIVSSTASPSPPPGNGNGGVS
ARNEDTISRDDENINNTSKSNSATTTPPTKSNIASEVTCSKSPVSPDSSSVTVESSGTNK
SCSTSTDQEMPTDSQIASDAAKTSDPPANSHNSSVDDSSTLDDKKKSPSKSETNEITKQL
TSEMVQKRLLAVFPSNEWANNPIAAEHLGNFLKSLNATMKSEEHAEGSKAEKADRKPCDN
DGTKNDNDASVKSKKDVVERS
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggctggacttggtattggaaaaaggacgcttttacgtgatgtcaatccacatctaatt
tgtccattgtgtcgtggctatctcatagatgctacaacagtagttgagtgtttacactcg
ttttgtagaagctgcatcttgaagcatctacgcaatgtagcacactgtccatcgtgcaaa
catgcgctcaacaaggcgaagccaaatatcaaagccgataaggcattgcaagacatcgtg
tacaaactggtgcccggattgtatcataaggaaatgctgaaaagaagggagttttacaag
aaacatcccgaacacgcgaattctgcaacgccggagcaacgtggtgaagatgtgagcgga
cggttaatattcagtccagaagatgtggtgagtttgagcctcgagtactcaacgcgaaga
atgggtccgtggattgcgttaaagaacaccgacacagacgcgaataattcgaacaacacc
aacagtaacaataagcataataataacaataatcatgatgacaataccggcggtaataga
agatatctccaatgtcccgctctggtaacagttgcgcacctgaaaaagttcttggcgcta
aaatacagcgtcgacataacgagatatactattgaaatctgccatcgacttgcaccactt
ccggaaaactggaccctcatagacgtcgcatacatttatccatggaagagaaatgcaccg
atgagattgttctatcgagtagcaaaagagcagagactcgaagcaccgtcacaccaaaga
ccgtcgacaccgggactcggagctcgggactgcgtgccgccgagtaacgcgcaagaaagc
tccaagtcagaagttaaatctgacagtaatagcaacgataaatctgtggcaaaagaattg
aataagaaggaggacgaggcaaacaaaacaactacgacgttgattacgacaacgacgaac
acatctcccttgtcgacaacggcatgcaaggactcgaacaagcagataaagagtccaatt
aagatactaaaaaatccggacggaaaatacgaggtgcagaagagttcatccgctaccctc
ggttggaatgaaaaagaacaaaccgtcgtcgtgacggatgcagacaaaaatcttacgaat
cctgagtttagtgttgtgaattccaacggagtgaagataacactgaagcagcgctcgccg
ccgcaaaacggcaacacgaagaagccgaagatcgttagcaacgttctgctgtcctgcagt
ccgccggagaaaatattgagcgcattgcaatcacagcagctacaaaacaaaagcaaattg
atgagtccagtttcgccggataagcaagagaagcaacgacgtaaagtgacttttgtggat
cgactaccgatgtctgaaaagacctctcccagcaccgccatgccgaaaaccgcactaaaa
aaaccggcggagcagcaggagaagaaacagttccttcaaggttttcaattgaccgccaga
gaaccaaccgcgtcggacgacggcaaggtgaaatctcccgtttgtgatactgtagcggtg
gccgacaagtttcttcaaaagactaatgcaaaagcggaggaattctctaagaagaacacc
gaaaagagcaacaacgagaacgttggttcgaagaccaacaacaataccaccgctacgaat
gtgatgagaaaacgtgttgccagcatgatgtctgctactaacccgcgagtatacgtgagt
aaaatcgacagtgtggacggacatacatttagtgcaggaacgaatccgaacagcaaaaac
attgtgagcggtaatcatgccgcaaagttggatgtgtacacgttctcgaacgacgcgccg
attcttccagccggggcggtaaaaagaaagtgtccgccaggtgtgccgattgccgatttg
aaacgccggaaatcgatgcctatcgcgccaaaacagagtgctagcaagaaacaaaatact
tctccgcacaactcggtcgcgaagcagtcgcacatttcctccgcggagcacgtagttcct
acaagcagagctgttaatatagcaggggattacggcggtgtggcccgcgtgtctaacgtg
aatatcgcgaaaacgtcaaccgatccattaacctcaaatgataccagagatttcctagtg
gatggctatggcttaaatattccggcgagtttgagcataacgctgacttcgccaaagtct
ccgggaacaagtaaacaatttgtcgaacccaacgatcccgtcgataacaatcggaaggtc
gcgctgggcaaggtgaatcctactatcacgttaaataacaagtcagtcgatccgcgcgtg
ttgaaggctctgaaaactgggcagatgaaaatgcccagcactccgccgaaagccaaatcg
gcaacgatggtggcgacgatggatcgtaacgaggcggcaaatcagcaacgaacgactggc
aggcagaagagagaacacgaatcgtctcgggatattctggacttgagcggaggtaacaaa
aaggtggagatacatcccttgagaattcctcagccggtgacgaagctcaagaccaataaa
aatcctgcgcccggcaggaacagcatgcaaccaggcggcatctccgatcagggtcaagtg
gtgacgcttctgggcggtcacagatattaccgatcgccgccaggctccctcacacctgcc
gctcatcgcgtcaccgattgtccgctaccaccagtgttgccgcgcgcacccgtttacgcg
ccgtctttttgcggctccataaaccgatcgaactcggatctctcgtccgtcttcccgagc
ctaccgagcctttacgctcttcatcaggcgccgaatcttcagcaatttcagttggataca
gtacgactgagaataccggagagcagttctaacccaggtattagcggcatgccgataaaa
agtcatctggccgctcagtgcgcgcccattaagcccgcaagaagttctgtggcgcctttg
gcggtacccatcgccaaacactcgtccgttaacaaaattacgaatgcgaataataattgc
atgggccaaggcaacgggaataatcctatggattttcatagcaacgaaggtctcgattct
acgggtgaagtttctcaagcgactattcaaaagagattttcttcgaacatagagagcaca
aataataaactcctttcgccgtgcaaactcgcaaagagtaatgatcaggccactgttgaa
attaagaacaaagacttgagtgttgaagctagaaacgaatcgaacgatactgacaattcg
atgatgcagcagcagcagcaacgacagcagcaacagcatcgcgaggcagcgagtcctagt
atcgtatcatcgaccgcttcgccgtcaccacctccaggcaatggcaatggtggcgtaagt
gcgaggaacgaagacaccatcagccgtgatgacgaaaatatcaacaatacaagtaaaagt
aacagtgcgacaacgacacctccgacgaagagcaatattgcctctgaagtgacatgcagc
aaatcgcccgtcagcccggactccagctcggtcacggtggagagttcagggacgaacaaa
agttgctcgacttcgacggatcaggaaatgccaacggactcccagatagcgtcggatgcg
gcaaaaacctcggatccgcccgcgaattcgcacaacagttctgtcgacgattcatccacg
ttggatgataaaaagaagtcccccagtaaatcggaaacaaacgaaattacaaaacaacta
acttctgagatggtgcagaaaagattgctggcagtttttccctcgaacgaatgggcgaat
aatccgatagccgctgagcatctgggtaacttcttgaagagtttgaacgcgacgatgaaa
agtgaagagcatgccgaaggatccaaggcggagaaagctgaccgaaagccttgtgataac
gacggtacaaaaaatgataatgatgcttccgtgaaatcgaagaaagacgttgtcgagcga
tcgtaa
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