Linepithema humile (Argentine ant): 105678224
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Entry
105678224 CDS
T04898
Symbol
kz
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhu03009
]
105678224 (kz)
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105678224 (kz)
Ribosome biogenesis [BR:
lhu03009
]
Eukaryotic type
90S particles
Helicases
105678224 (kz)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
ResIII
nSTAND3
ATPase
Flavi_DEAD
nSTAND_NTPase5
Herpes_ori_bp
WHD_HA2
AAA_30
NAT10_TcmA_helicase
FtsK_SpoIIIE
AAA_23
AAA_16
Motif
Other DBs
NCBI-GeneID:
105678224
NCBI-ProteinID:
XP_012232791
LinkDB
All DBs
Position
7:complement(15645319..15652817)
Genome browser
AA seq
1182 aa
AA seq
DB search
MGRKRYNWKSRAVANVEIDNSTTKKIAVDIEHHADNYDNCNALVLPTKKRKTKKIDKKVT
TRVLSKKCRKQLEKVIEQKKKKLKRATLLENLAKVQVSPAELQQYVSLTSLQNKGLKRHF
RELETPISKLKCKTSEEEESNATEAGVNSIKGSKKKRLAILDNKKQDKDTSNQNVVGFES
SDSNSECDIESDNESDNEAPDVINSIVTPDIMTSEMSDEKDLPKNVDERTIPTKSQGFDK
PEERVQQQNNNPNIRTPSVFVPLNRKQEIQSVRLKLPVVAEEQIIVETINENPVVIITGE
TGSGKTTQVPQFLYEAGYAQNKLIGITEPRRVAAMSMSKRVAEEMNLTQKQVSYLIRFEG
NVTEETKIKFMTDGVLLKEIQSDFLLTKYSVIILDEAHERSVYTDILIGLLSRIVPLRNK
RNDPLKLIIMSATLRVEEFVENVRLFKVKPPVITIQTRQFPVTIHFNRRTSEDYVNEALR
KAIKIHTRLPEGGILIFLTGQQEVHTIVRKLRKAFPLRKNKLFRQQVKSINLEKSKSPSK
EVTNETQSEEDDTDDDFDAEEALRRNKQRQKKRIVLPNINLDDYSVIPTDDTHEDLIDAQ
DDEDEDEDEDMIDFKGLTNSQPLWVLPLYSFLPSHKQARVFEAPPEGCRLCVVSTNVAET
SLTIPNVRYVIDSGRCKTRMYDKVTGVSTYHICYTNKAAASQRAGRAGRTQPGHCYRLFS
SAMYNNQFEEYGQSEIQRKPVDDLLLQMKAMHIDKVVNFPFPTPPDIVQLKSAEKRLMLL
GALQQPPKKQEETYCAKVTPLGHSIAAFPVAPRYGKMLALSHQHNLLKYTICMVAALSVQ
EVLIEALSMEGSAKNKWLQIRRHWAGTGNSLLLGDPMVLIKAIAAAEYAGSEGKLLSFCE
ENGLRHKAVVEIKKLRQQLTNEINLNIPDLNLSIDPKMTLPTNTEAKLLRQIVLAGMVDQ
VAKKVSLDEVKEDQDKAKWKYAYRTPEMEEPVFMHSSCALRKVSPEWVVYQEVYETNKMY
MRGVTAIEPEWLPKFAPALCHLSEPLADPPPRYNSETGKIICRVSGTFGRAGWELPPINI
EHPLTVDGVRLFAYFFLEGQVCPKLKRFVPSLLTTPGSITKSWAKLIPRTQAMTQMLLSH
GIMSKDKLLDTWSLDKKFLLSAYQKWLPESAHTEVALLWPPL
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaggtataattggaagtctagagctgttgcaaatgtagagatcgataat
tctaccaccaagaagattgcagtggatatcgaacatcatgcagataattatgataattgt
aatgctcttgttttacccactaaaaagagaaaaacaaagaagatagataaaaaagtaaca
actcgggtactatcaaaaaaatgcagaaaacaattggagaaagtaatagagcaaaagaag
aaaaagttaaagagagcgacattgttagaaaatttggcaaaagtgcaagtgtctccagct
gaattgcaacaatatgtgagtttaacatctttgcaaaataaaggtttgaagcgtcatttt
cgagaactagagacaccaatctcaaaattgaaatgcaagacaagtgaagaagaagaaagc
aatgcaacagaagctggtgtaaattccattaaagggagtaaaaagaagagattagctatt
ttggataataaaaaacaagacaaagatacatctaatcaaaatgtggttggatttgaatct
agtgacagtaacagtgaatgtgatattgaaagtgacaatgaaagtgacaatgaagcacca
gatgttatcaatagtattgttactcctgacattatgacaagtgaaatgagtgatgagaaa
gatcttcctaaaaatgtagatgagagaacaattccgactaagtcacagggatttgataaa
ccagaagaaagagtacaacagcaaaataataatcctaacattcgcacaccttctgtattt
gtacctcttaatagaaagcaggaaatacagtcagttagattaaaactacccgttgttgcg
gaagaacaaattatagttgaaacaataaatgaaaatccagtagttataattactggagag
acaggaagtggaaagacaacacaagtgcctcaatttttatacgaagctggatacgctcaa
aataagttaattgggataaccgaaccaagacgagtggcagcaatgtcaatgagtaagcgc
gtggctgaagaaatgaaccttacccaaaaacaggtttcatatttgattcgttttgaggga
aatgtcacagaggaaacaaagatcaaattcatgaccgatggtgttttgttgaaagaaatt
caaagtgattttctattgacaaagtattctgtaattatactggatgaggcacacgaacgc
agcgtgtacactgatatcctgataggtctattgtcgagaattgttcctcttcgtaataaa
cgcaatgatcctttaaaactaataattatgtcggccacattgcgtgtggaagaattcgta
gaaaatgtgaggctgtttaaggtgaaaccgccagtaatcacgattcaaacacgacaattt
cccgtaacgatacacttcaatagacgtacaagcgaggattatgtcaatgaagcattgcgc
aaagcgataaagatacatactcgtctaccagaaggcggtatattaatatttttaacaggt
caacaggaagtgcacacgattgtacgtaaattgcgcaaagcatttccactgagaaagaat
aaactttttcgacaacaagttaagtccatcaacttggaaaaaagcaagtcaccctcgaaa
gaagtaacaaacgagacgcaaagtgaagaggatgataccgatgatgacttcgatgccgag
gaagcgttacgccgcaacaagcagaggcaaaagaaacggattgtacttccgaatatcaat
ctggacgattattcagtaattcccactgacgatacgcatgaagatttaatcgatgcacag
gatgacgaagacgaggatgaggacgaagacatgatcgatttcaagggattgacgaactct
cagccgttatgggttctgcccctctactcttttttgcctagtcataaacaagccagagta
tttgaagcgccgccggaaggatgtcgcttgtgtgtggtgtctaccaatgttgcggaaact
tcactaacgattcccaacgttagatacgtgatagatagtggtcgttgtaagactagaatg
tacgataaagtaactggtgtgagcacatatcatatttgctacacaaataaagcagcggcc
agtcaacgcgccggcagagcgggcaggacacaacctggtcattgctacagattattctca
tcagctatgtataataatcagttcgaggaatacggccaatcagagatacaacggaaacca
gtggatgatttactactgcaaatgaaggcaatgcatatagacaaggtcgtgaatttcccg
tttcctacgccgccggacattgtgcaactgaaatccgcggaaaaacgccttatgttactc
ggagcgttgcagcaaccaccgaagaaacaggaagaaacgtattgcgcgaaagtaacgcct
cttgggcatagtatcgccgcgtttccggttgctccacgttacggcaaaatgctggcattg
tcgcatcagcataacttgttgaaatacacaatatgcatggtggcggctctcagcgttcaa
gaagtgttaatagaagcgcttagcatggagggttcggctaagaacaaatggctgcaaata
cgtcgtcattgggctggtactggcaatagtttgcttcttggtgatccgatggttctgata
aaagccattgcagctgctgaatatgcgggatctgaaggaaagttgttgtctttctgcgaa
gaaaatggcttgagacataaagctgtagtcgagataaagaaacttagacaacagctaaca
aatgaaattaatttaaatataccggacctaaatttgtctattgacccaaaaatgacgcta
ccaactaatacagaagcgaaattattgcgtcaaatagttctcgcgggtatggtagatcaa
gtggcaaagaaagtttcacttgacgaggtgaaggaggatcaggacaaggcaaagtggaag
tatgcttacaggacgccagaaatggaagaacctgtgttcatgcattcttcgtgtgcccta
cggaaagttagtcctgaatgggtggtttatcaagaggtgtatgaaacaaataagatgtac
atgcgcggtgtcacagcgatagaacctgaatggttgccgaaatttgcacctgcgttatgt
cacctcagcgaaccattggctgatccgccaccaagatataattctgaaaccggaaaaatc
atctgtcgcgtgtctggcacatttggaagagccggatgggaactaccgccaataaacata
gaacatccattgacggtggatggtgttagattatttgcctattttttcttggagggtcaa
gtgtgtcctaagttgaaacgattcgtgccatcgttactgacgacacctggcagcatcact
aaatcatgggccaaattaataccacgtacacaagcgatgacacaaatgctattatcgcat
ggaattatgtccaaagataaactactggatacttggagtttggacaagaaatttttacta
tcagcttatcagaagtggctgccggaatctgcgcatacggaagtagcacttttatggcca
cctttgtaa
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