Linepithema humile (Argentine ant): 105678297
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Entry
105678297 CDS
T04898
Symbol
pds5
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lhu03036
]
105678297 (pds5)
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105678297 (pds5)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
105678297 (pds5)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
105678297 (pds5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_GCN1
PAW
Motif
Other DBs
NCBI-GeneID:
105678297
NCBI-ProteinID:
XP_012232935
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All DBs
Position
6:7143307..7151002
Genome browser
AA seq
1208 aa
AA seq
DB search
MSEIIYPAGCRSVTEDLGADELIRRLKTLAHTLQAMGQDEGMYQQYIPLALHLAEEHFLM
HQSKDVQLLIACCIADVLRVYAPEAPYKDAEQVKTIFLFLIKQLAGLKDPKDPAFKRYFY
LLENLAYVKSFNMCFELEDCQEIFCALFSLMFKIVNDEHSGKVKSFMLDVLCPLITESDI
VSNELLDIILMNIVEPNKTQKKNAYLLAKELVIKCSDTLEPYIQAFFNHVLILGKEEKSL
QICKKVYDLIYELNHICPSVLLSVLPQLECKLKSSSETERLGAVALLARMFSEKGSQLAV
QHTQLWRAFLGRFNDISVSIRIKCVQYSMHFLLNHPELRKDITDTLKLRQHDADESVRYE
VVTAIVTTAKRDFEVVSDSEDLLEFVKERTLDKKFKIRKEAMSGLAMIYKKHLNDADVPQ
ATKKAVIWIKDKILHGYYMAGMEDRLLVERLLNTCLVPYQLPAEERMKKLYHLLGTIDDH
ASKAFVELQKHQLAVRRAVVEWIEIVKKPDAKNELVTKIHQISRFLPDPMKVQEFLQKFS
SHMRKEAKLLQEMETIVQPNVSCKECADTITKVLKRLGQPVMTNLYYNTIKMLLERVSSV
MIDEEAIRVLIGYVLDCLKSGNVIEEVGLNPNNAGEKGLRLLVMLSFVFGPHFLHNDILM
QLVNLLELEDEMVAPLVLSIFTFLGKYKPLCDVAPEIMNLMVPICKNFAETGTPKQAKQA
VRCLFVNMTNIHDTIFPEIIERIKNTLTPTSEYYRTSIVTLGHIAYNLPDKYPVQIKNMV
SRKIVKELLVKESSEQNEPIEGDWCREDQLPEETRCRLEGLKCMARWLLGLKTDVLSAQK
TFRMLNAFMVNKGDLLSQGRLSKAEMSWLRLQAGCSMLKICEQKGVGDQFTAEQFYNLSQ
LMVDEVPQVREAFGSKLHKGLGRGIPNKCLPLDFMGYYALAGKEQDKRLKCVLKTYMQTD
INKRRDYVKTLSLGTVERAMGQLPHILPDYMLVFAVPILAHDPEFTSHLTVSQLKVIQQC
LWFILEPLITKNEYYCYGFYKNLVERMKSHKDALKPEDNEMNYKLWAVCDLAMNVIYTKT
TNFDMKEFPSETRIPTMYFKRADETMSNIKNYLPSELQINMTTQKGKGFHNTHTTNERPQ
RRAKSKQQKEVGIGPNETDARLQVEEMECIDAQPAEASETRIQLPGLEEEIEEPPAKRAL
KESDKVNK
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaataatataccctgcaggatgcaggtcagtcaccgaagatttaggtgcagat
gagctaatcagaagacttaagacactagcacacacactgcaagccatgggacaagatgag
ggaatgtaccagcaatatattccacttgcgttacacttggcagaagagcactttctgatg
catcagagcaaagatgtacaattattaattgcctgctgtattgcagatgtcttaagggtt
tatgcaccagaggctccttataaagatgctgaacaggtcaaaacaatattcctatttttg
attaaacaactggcaggattaaaagatcctaaagatcctgcttttaagaggtacttctac
ctacttgaaaatttagcttatgttaagtcatttaatatgtgctttgagttggaggattgt
caagagattttctgcgcattattttccctaatgttcaaaatagtgaatgatgaacattct
ggcaaagttaaaagttttatgttggacgttctctgtccactgattaccgaatcggacatt
gtcagcaatgaacttttggatatcatactcatgaatattgtagagccaaacaaaacacaa
aagaaaaacgcatatttgcttgctaaagagctagtgattaaatgtagcgacacattagaa
ccatatattcaagcattcttcaatcatgtcttaatactaggaaaagaggagaaaagttta
caaatttgcaagaaagtgtatgatttaatttacgaattgaatcacatatgtccgagtgtc
ttgctgtccgtccttccacagttagaatgcaaattgaaatcttcctccgagactgaaaga
ttgggcgctgtagcattgctagcgagaatgttctctgagaaaggttcgcagttggccgtg
cagcacacgcagttgtggagggcgttcctgggacgattcaacgatattagcgtttccatt
cgtattaaatgtgtgcagtattcgatgcatttcttgttgaatcatcccgaactgaggaaa
gatatcacagacactttgaagttaagacaacacgatgctgatgagagcgttcgctacgaa
gtcgttacagctatagtgacaacagccaaacgagattttgaagtcgtatcagatagtgag
gacttacttgaatttgtcaaagaaagaacattggacaagaaatttaaaatacgaaaagaa
gcgatgtctggcttagctatgatatacaagaaacacttgaacgatgcggatgtgccgcaa
gccacaaagaaggcagtcatctggataaaagataaaatattgcatggttattacatggca
ggcatggaagacaggctgttggtggagagactgctaaatacgtgcttagtaccttatcag
ctaccagctgaagagagaatgaaaaagttataccaccttttaggtacaattgatgatcac
gcttccaaagctttcgtggaacttcagaagcatcagcttgccgtgcgaagagcagtggtt
gaatggatagaaattgtgaagaaaccggatgctaagaacgaactggtgacgaagattcat
caaatatcgcgttttctacccgatcctatgaaagtgcaggaattcctccaaaagtttagc
tctcatatgaggaaggaggcgaaattactgcaagagatggaaaccatcgtacaaccgaat
gtgtcctgcaaggaatgtgcagacacgataactaaagttctcaaaagattaggacaaccc
gtcatgactaatctatactataatacgattaagatgttgcttgagagagtaagctctgtt
atgattgatgaggaggcgattagggttttgattggatacgtcttagactgtttaaagagt
ggtaacgtgatagaagaggtcggccttaacccgaataatgccggagaaaagggactgaga
ctattagtgatgctatcgtttgtgtttggcccgcatttcttgcataatgatatcttgatg
caattggtcaatctgctcgagttagaggacgaaatggtggcaccattagttctctccatc
ttcactttcctaggcaaatacaaacctttgtgcgacgttgcaccagaaataatgaatctt
atggtgccgatatgcaaaaattttgccgagacgggaacgccgaagcaggcaaaacaggcc
gtgagatgtttatttgttaacatgaccaacattcacgacaccatattccccgagatcata
gagagaattaagaacacgctgacgccgacgtcggaatattatcggacatctatagtcaca
ttaggtcacatagcatataatttgccagacaaatatccagtacaaataaaaaatatggta
tccagaaaaatagttaaagaattactagtgaaggaaagcagcgagcaaaatgagcctatc
gagggagactggtgcagggaggatcaattaccggaggagacgcgatgcagattggaaggc
ttgaagtgcatggcacgctggctgttgggattgaagactgatgtgttgtcggcgcaaaag
acattcaggatgctgaacgcctttatggttaacaaaggtgatctgctgtcgcaaggacgt
ctgagtaaagctgagatgagttggttgcgactacaagcgggttgctcaatgttgaagata
tgcgaacagaaaggcgtcggcgatcaatttactgcggaacaattttataatctttcacaa
cttatggtggatgaagttcctcaagtcagagaagcttttggcagcaagctgcataaaggt
cttgggagaggaattccaaacaaatgtttaccattggatttcatgggatattacgctctg
gctggaaaggaacaagataaaagattaaaatgtgtgctaaaaacatatatgcagacagac
ataaataagagaagggattatgtaaagactctttcgttgggtacagtcgagcgagctatg
ggtcaactaccccacattttaccggattacatgctagttttcgcagtacctattctcgca
catgatcccgaatttacgagtcacctaacggtgagtcagttaaaagtcattcagcagtgt
ctttggttcattttggagcctcttatcacgaagaacgaatattactgttatggattttat
aaaaatcttgtggagcgtatgaagagtcataaagacgcattgaagcctgaggacaacgaa
atgaattataaactgtgggctgtttgtgatttggcgatgaatgtaatatacacaaaaact
accaattttgacatgaaagagtttccgagcgagacgcgaattccgacgatgtacttcaag
cgggcggacgaaacgatgtccaacattaagaattatttaccatcggaactgcagataaac
atgacgacacaaaaaggaaaaggattccacaacacacacacgaccaatgaaagaccacag
cgcagagctaagtccaaacagcagaaggaagtgggcattggacctaatgaaactgatgca
agactgcaagttgaagaaatggaatgtatcgatgcacagcctgccgaagcatcagagacc
agaattcaactacctgggttggaagaagaaatcgaggaaccaccagcgaagagggcatta
aaggaatcggataaagtaaataaataa
DBGET
integrated database retrieval system
