Linepithema humile (Argentine ant): 105678524
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Entry
105678524 CDS
T04898
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105678524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lhu03000
]
105678524
Transcription factors [BR:
lhu03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
105678524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
105678524
NCBI-ProteinID:
XP_012233371
LinkDB
All DBs
Position
7:772823..779783
Genome browser
AA seq
1049 aa
AA seq
DB search
MGQSDDIEDSTYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA
CRKSSTPTVGRTGGNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMPQDFRTKIKK
LETKFSVSWLIFTKYQPLFTDIFKDPKEDTTRPPRSRRHKAVPCTPSRVFEFCWTLFIYI
KGTFPDISDDLVNSYHLLLVCCDLIYNNAVLANRKDLLNPNFSGLPANFNDENYSPPRTI
DCIVSLLCERHGAIPIEAKVIKEYYMKNCMNKLFNEKILRGDQSNFSGILGTEALSFDSN
NKAINKAYEQRVLSVGDFDERIFLAEWRRINLNNISNSDTFGQNIVKHDQFAQHVNLKGN
DANENIGSPTQMMNIDDFREQLQMKKEQHIGQMQYMAPPTPLTGRKYLRSKDMSNITPVI
TATQSVIKLQALIAGQSAPSESLLQMLNSCSQNVKSLVEAKVTQIGEQFCASYNNNVNSA
SINDGSTSDYGRRRLLMGQTLFYKLLEMILNDEKRKKPNYDITNLLSNELFIQCLFACCL
EIVIYSYQSNDKTFPWILKALNLDAYYFYKVIEIIVRTEDQLSRDVVKHLNQIEEKILES
LAWQSDSPLWQTIVSLKDGVPSCEEVSLPGTLETVDPNAPGQPVLRRMAFDRDRTHHDVQ
QSPISSASERFQSPIAGSGVAKKRLFPETRITGQSVLRVGQSVLSSNRGGLLIDGSQKIL
LVPDQAISKTSGAQVSHNSVQVVQTANKDMAKPRKTGSVALFFRKFYNLAFVRMQDLCNS
LEISDTDKKKIWTIFEYSIKDRTELMKDRHLDQILMCAIYVICKLVKMEKNSFTEIMRCY
RLQPQAESHIYRSVLITKIPNDGNPTMSNNEKSEDNGTLGENTAPPTPTNMAGTSQNFDG
EERGDLIKFYNTVYVPQVKDFANKFGLARGSVMNLSLSPLPKGKAPANSPVRRVTSSIMT
RTLDPKAISASPAPQLSYCFSRSPAKDLEAINKMMISVEAKKGVGKRLLSDDTDVEMAEG
TSPKKPTTLPLHVARKVENIMGDRRTQNQ
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgggacagtcggacgatatcgaggattcgacgtacagtcgacaccaggatctctgccag
aagttaaatatggacgcgaccgccgcgtccgaggcctggaagtcctacgaaactatccgt
cagaactatactctcgagggtgatcaattgcattggataggatgtgcattatacgtagct
tgtagaaaatcctctacacctacagtgggaaggactggtggtaatgtggaaggcaactgt
gtatcattgacacgtctcttgcaattgtgtaatcttccattgatacaattctttacaaaa
agcaaatcatgggcagatatggcaaatatgccgcaagattttcgcaccaagataaaaaag
ctagaaacaaagttttcagtttcttggcttatatttacaaaatatcagccactgtttact
gatatatttaaggatcccaaagaggatactactagaccgcctaggtctagaagacacaaa
gcagttccctgtaccccttccagggtctttgaattctgttggacattatttatatatata
aagggtacatttcctgatatttcggacgaccttgttaactcttatcatctcttgttagtc
tgctgtgatcttatatataacaatgctgtgttggcaaacagaaaagatttgttaaatccc
aatttttctggcttaccagcaaacttcaatgatgagaattatagtccaccaagaacaatt
gattgcattgttagtttgttgtgtgaacgtcatggagcaatccctattgaggctaaagtt
ataaaggaatattacatgaaaaattgtatgaataaactatttaatgagaagatcttacgc
ggtgatcaatcaaatttctctggtatactaggcactgaggcactgagtttcgatagtaac
aacaaagccattaacaaggcttatgaacagcgtgtattaagcgttggggattttgatgaa
agaatttttttagcggaatggagaagaataaatttgaacaacatatcaaattcggatacg
tttggtcaaaatattgttaagcatgaccagtttgctcaacatgtaaatcttaaaggcaac
gacgctaatgaaaatatcggttctcctacgcaaatgatgaacattgatgattttcgtgaa
caattgcaaatgaagaaagaacagcatattgggcagatgcagtacatggcacctcctaca
ccactgactggtcgtaaatatctccgatcgaaggatatgtctaatataacgccagttatt
acggcgactcaaagtgtcattaagttacaagctttgatagctgggcaatctgctccaagt
gaaagcctcttgcaaatgttgaacagttgttctcaaaacgttaaatctttagtcgaggcc
aaagttacacaaattggtgaacaattttgcgcaagttataacaataatgtaaattccgcc
agcataaacgacggttcgacatcagactatggaaggaggcgtcttcttatggggcaaact
ttgttttataagcttctggaaatgattttaaatgatgaaaagcgcaagaagccaaattac
gacataactaatttactttcaaatgaactttttattcaatgtctgttcgcttgctgtctc
gagatagttatatattcttatcagagcaatgataagacatttccatggatactaaaagct
ttgaatttagacgcttactatttctataaagttatagaaattatagtaagaactgaggat
caattatcacgggatgttgtcaagcatttgaatcagatcgaagagaaaattctggaatct
ttagcttggcaaagcgatagtcctttatggcaaactattgtttccttaaaggatggtgtg
ccgagttgtgaggaagtatctttacctggcacattggaaactgttgatccaaacgcacct
ggtcaaccggtattgagacggatggcttttgatcgtgatcgtacccatcatgatgttcaa
caaagtccaatttcgtctgcttcagaaaggtttcagtctcctatcgcaggatctggtgta
gcgaagaagcgattattccctgaaacaagaattaccggtcaaagtgtcctacgcgtcggg
cagagcgtgttatcttctaacagaggaggactgttaatagacggaagccaaaagattctt
ttggtacccgatcaagccatttcgaaaacatcgggcgcacaagtttcacataattcagta
caagttgttcaaacggccaacaaagacatggctaaaccaagaaaaacaggttctgttgca
ttgtttttccgaaagttctacaatctcgcgttcgtacgcatgcaagacttgtgcaattcg
ttagaaatatcagataccgataagaagaagatctggacaattttcgaatactccatcaag
gatcgtaccgaattgatgaaagatcggcatctcgatcagatcttaatgtgtgcaatttat
gtaatatgtaaattggtgaagatggagaagaactcgttcactgagattatgcggtgttat
cgtctgcaaccgcaggcggaatcgcatatatatagatcggtgcttataacaaaaattccc
aatgatggaaatccgacgatgagcaataatgaaaaatcggaggacaacgggacattggga
gaaaatacagctccgccgacgccgacaaatatggccgggacatcgcagaacttcgacgga
gaggaacgcggtgatctaatcaaattctacaatacggtatacgtaccgcaggtgaaggat
tttgcaaacaaatttggattggctcgcggtagcgtcatgaatctctcactgagcccttta
ccaaaaggaaaagcacctgctaattccccagtgagacgtgttaccagtagtattatgaca
cgtactctggacccaaaggctattagtgcgtcaccggcgccgcaattaagttattgtttt
agtcgtagtcctgccaaggatttagaagccatcaataagatgatgatatctgtagaagcg
aaaaagggtgtaggaaaacgattgctttctgatgataccgatgtagaaatggcagaaggt
acatctcctaaaaagcccacgacccttcctctccacgtcgcgcgaaaagtggaaaatatc
atgggagaccgacgaacgcaaaatcaataa
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