Linepithema humile (Argentine ant): 105678634
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Entry
105678634 CDS
T04898
Symbol
HBS1
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105678634 (HBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105678634 (HBS1)
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105678634 (HBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Dynamin_N
Ras
SpoIVA_ATPase
Motif
Other DBs
NCBI-GeneID:
105678634
NCBI-ProteinID:
XP_012233555
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Position
1:33849001..33853943
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AA seq
698 aa
AA seq
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MSRHRDVRCMNYSDEYDGYDDVYGHSVEDDYCVSPSAEQFLFDRSKQQNIASFITEPDIV
EDNEEDIVDDIGESSSSVNEEKCNLSELERAKLISCIETIRNVIGDTVPESKLREKIISS
NFDADVALDAILKESSPKNASDSTANKERLERHPGNKLSSKPALQVTTPSTIKVVPTGTK
PVVKGFDLSGVENADLLSPRCQSPSSNRNSPETKRKEDIIKKEKTLSSTTNSPRCQSPVS
GHITPELDVKTKSNASNEEKVDVQAIYKNKRGDSKEQIHLVVVGHVDAGKSTLLGRLLCD
LGQVPQRLIHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDVGHSKFETDTKSITLL
DAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAV
VVNKLDTVNWSKDRFNKIVDKMSVFLKQAGFKDTVTFVPCSGLSGENIITKPKEQLFNWY
TGSTLVNVIDNFKCPERPVNKPFRFSVNDIFKGTGSGFCVSGHVETGMVSLGDKVLILPQ
NEIAVVKGLQSDEVSMTNAFAGDHVVLTLAGIEQQNVGVGDIICHPQSPIPVTTCFQAHV
VIFAIAKPITKGLPVVMHQQSLVQPAVITKLIAQLHRSTGDVIKKKPRCLPKNSSAIIEV
ATQNPICMELYKDIKQLGRVMLRLEGTTIAAGLITKIL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcatcgagatgttcgttgtatgaattactctgatgaatatgatggctacgac
gatgtttatggacattcagtggaagatgattattgtgtatcacctagtgcggaacagttt
ttgttcgatcgaagcaagcaacagaatattgcttcctttatcacggaaccagatatagtg
gaagataatgaggaggatatagtagacgatattggtgagtcttcatcatcggtcaatgaa
gagaaatgtaacctttctgaactggaaagggcaaaattaatatcttgtatagaaacaatc
agaaatgtcattggtgacactgtgcctgaatctaagttgagagaaaaaattatttcatca
aactttgatgcagatgtggcacttgatgctattttgaaagagtcttcaccaaaaaacgct
agtgattcaacggcgaataaggaacgattggaacggcatccaggtaacaaattatcatct
aagcctgcattgcaagttacaacaccttctactataaaagttgtacctaccggtacgaag
cctgttgtgaagggtttcgatttgagtggcgtagaaaatgcggatttattaagtccacgt
tgccagagcccgtcttctaatcgaaacagccccgagaccaagcgcaaagaggatatcata
aaaaaggagaagacactctcgtcgacaacgaacagtccaagatgccagtcgcctgtatca
ggtcacataacgccggagttggacgtcaaaacaaaatctaacgcatccaacgaagaaaag
gtggatgtgcaagcgatatataagaataaaagaggcgacagcaaagagcagattcatcta
gtggttgttggacacgtcgatgctggtaaaagcacattgctcggacgattgctctgtgat
ttgggtcaagtgccgcagagactcattcataaatatcagcaagagagcaagaagataggg
aagcagtcgtttgcttacgcttgggtgctggacgagaccggtgaggaaagagagcgcgga
ataacaatggacgtaggccactccaagttcgaaacagacacaaagtctattactctccta
gatgcacctggtcacaaggattttataccgaatatgataaccggcgccacgcaagcggat
gtagctttgttggtggttgatgcgaccagaggcgaatttgaaactggatttgacagcggc
gggcaaacacgcgaacacgcactgctattacgttccttgggagtatcgcaactagcagta
gtcgtaaacaaactggatactgtaaattggtctaaggatagattcaacaagatagtcgac
aaaatgagtgtgtttctgaagcaagctggcttcaaagacactgtcacttttgtaccttgt
agcggtttatccggagagaatatcataacgaaaccgaaggagcagctttttaactggtat
accggatctactctagtcaatgtaatcgataattttaagtgtccagaacgacctgtaaat
aaaccattccgtttttcggtcaatgatatattcaaaggtaccggatccggattctgtgta
tccggccatgttgaaacgggcatggtatctttaggtgacaaagttttaatactacctcaa
aatgagattgcagttgttaaaggtcttcaatcggatgaagtttcaatgacaaacgcgttc
gctggtgatcacgtggtgctgacgttagcgggtatcgagcagcaaaacgtgggcgtcggc
gatataatttgtcatccgcagagtccgatacccgtgacaacgtgctttcaagcacatgta
gttatattcgcgatagcaaaaccgattacgaaagggcttccagtggtgatgcaccagcag
tctttggtacaaccggcggtcatcacgaaattaatagcgcaacttcatcgcagcaccggc
gacgtgatcaagaagaaaccgcgttgcttaccgaagaattccagcgcgattatcgaggtc
gcgacgcaaaatccgatctgcatggaattgtacaaggatattaagcagctgggtagagtt
atgttacggttagaaggcaccactatcgcagctggtttaattacaaaaattttgtaa
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