Linepithema humile (Argentine ant): 105678699
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Entry
105678699 CDS
T04898
Symbol
Polr2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9 isoform X1
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03020
RNA polymerase
lhu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105678699 (Polr2I)
09124 Replication and repair
03420 Nucleotide excision repair
105678699 (Polr2I)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhu03021
]
105678699 (Polr2I)
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105678699 (Polr2I)
Transcription machinery [BR:
lhu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
105678699 (Polr2I)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105678699 (Polr2I)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
Zn_ribbon_RPB9
Zn_ribbon_recom
Ogr_Delta
DUF4892
Zn_Ribbon_TF
DZR
Motif
Other DBs
NCBI-GeneID:
105678699
NCBI-ProteinID:
XP_012233645
LinkDB
All DBs
Position
6:complement(19269733..19272183)
Genome browser
AA seq
146 aa
AA seq
DB search
METRDGVCGTASRGAIMSKITGYDTHDDGPGFVGIRFCQECNNMLYPKEDKENKVLMYAC
RNCDFKQLADSNCIYVNKIMHEIDELTHIVADVISDPTLPKTEEHPCPKCNHREAVFFQA
QTRRAEEEMRLYYVCTNQHCSHRWTE
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggagacgagggacggagtgtgtggtacggcgtcgagaggcgcaatcatgtcaaagata
acaggttatgatacgcacgacgacgggccaggattcgtgggaattcgattttgccaagag
tgcaataatatgttatatccgaaagaggataaagagaacaaagtgctcatgtatgcgtgc
agaaattgcgattttaaacaactggctgacagcaattgtatttatgtaaacaagatcatg
cacgaaattgacgagctgacacacatcgttgctgacgtgatatcggatcctactttgccg
aaaacagaagaacatccatgcccaaagtgcaatcacagagaagctgtatttttccaggca
caaactaggcgggctgaggaagagatgagattgtattatgtgtgtacgaatcagcattgt
tcacacagatggacagagtaa
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