Linepithema humile (Argentine ant): 105678705
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Entry
105678705 CDS
T04898
Symbol
Usp39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105678705 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105678705 (Usp39)
Spliceosome [BR:
lhu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
105678705 (Usp39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
105678705
NCBI-ProteinID:
XP_012233657
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Position
2:complement(7522316..7524842)
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AA seq
516 aa
AA seq
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MLYSMPKNMASVKQVISEKRKFVDVGSDSDNETEKNVKYMRTKSEAPRLCPYLDKINRQF
LDFDFEKLCSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHTLKFYCL
PDNYEIVDSSLDDIKYVLNPTFDKIQIVQLDKSDKQSRAIDGSMYSPGIVGMNNIKANDY
CNVILQALSHVTPLRDFFLRESNYSHVRRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVS
PHEMLQAVVLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKKRDSSIIYKTFLGHMRI
YTRKIPPLELEESQRSELLHTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNL
YTLLNKFNAITEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPV
KNVDFGDILTPEVKAKHPYTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYELQDLHVT
QILPQMITLTEAYIQIYELRKDTHMENGDNKNKKTM
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgttatattcaatgccaaaaaacatggcgtccgttaaacaagttatatcagagaaacga
aaatttgttgacgtcgggagtgattcggataatgaaacagaaaagaatgtaaaatatatg
agaacaaaatcagaggcaccacgattgtgtccatatttggacaagattaatcgacaattt
ttagattttgactttgaaaaattgtgctccgtgtcgctgtctaggataaatgtatatgct
tgtctggtttgtggcaaatatttccaaggcagaggaactaatactcatgcttatacacac
agtgtagcagagagtcatcatgtctttcttaatttacatacattaaaattttattgttta
ccagataattatgaaatagttgattcatcactggacgacattaaatatgtattaaatcca
acttttgacaaaatacaaatagttcaactagataagagcgacaagcaatccagagcaatt
gatggctctatgtattcaccaggaattgtgggaatgaataacataaaagcaaatgactac
tgcaatgtcattttacaagcgctttcacatgttacacctttgagagatttctttttaaga
gaatctaattattctcatgtgaggagaccacctggtgattcatcctatcttttggtacaa
agatttggtgaactcatgcgtaaattgtggaatccacgtaactttaaagcccatgtaagt
cctcatgagatgttgcaagcagtagttttatggagtaaaaaaagatttcagtttacagag
caaggcgatccggtggattttttatcatggtttttaaatgctctacatttggcattaaat
ggtacaaagaagcgggattctagcataatttataaaacttttttgggacatatgcgaata
tatacgcgaaaaataccgccattggaactagaagagagccaaagaagtgaactgctgcac
acggtcgaatatggcgaaactgtaacggaaagcccttttttatatcttacttgcgatctt
cctccgcctccattattcaaagatcagttcacggaaaacattatcccacaggtaaacttg
tacactctcttgaataaatttaatgccattactgagaaggagtataagacgtataaggaa
aatttcatgaaaagatttgaaattactgaactgccaccgtatcttatactttatataaaa
agatttaccaaaaatacattttttgtcgagaaaaatccaacaatcgtcaatttccccgtt
aaaaatgtggattttggagatattttaacaccggaagtgaaagctaagcatccatatacg
acgtacgatctagtagccaatatagtacatgatggtgaacctggtcaaggaacatacaga
gttcatattttacacagagccactggtcagtggtatgaattgcaagatttacatgttact
caaattttgccccaaatgattactctcactgaagcatatatacagatttatgaattaaga
aaagacacgcatatggaaaacggagacaataagaataaaaaaactatgtga
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