Linepithema humile (Argentine ant): 105678732
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Entry
105678732 CDS
T04898
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like isoform X2
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105678732
03036 Chromosome and associated proteins [BR:
lhu03036
]
105678732
Spliceosome [BR:
lhu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105678732
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
105678732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
105678732
NCBI-ProteinID:
XP_012233756
LinkDB
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Position
7:complement(11763790..11767749)
Genome browser
AA seq
908 aa
AA seq
DB search
MEMDVANEENNEKAFRKASNEIEEETMTSETEEKIIEKMDDESEFDSDDEENVDEAEVKS
LQASLTENAYDYVSHVTLINKLQTMGELDRLRIARDNMSNLYPLSPELWLSWMRDEIKLA
ITGEQKTEIVKLCERAVKDYASVEVWLEYLQFTIGNMGTGKDAINNVRQLFERALTAIGL
HTVKGAIIWEAFREFEIVLFASIDTVNVAEKKEQLGCIGNLFRRQLACPLLDMDKTYEEF
QSWRVGDGAEAVIDDNIVLRGYEEAFAKLNLLLPYEEKLISAQGESELLDAYKGYLLYEK
QQHDPGRIIILYERAITDLSLEVSIWYDYLTYLEDTIKIESVIDLVYQRASRNIPWCSRI
WQKWIRLYEKWERSILETQKLLEDALSVGFSTAEEYRNLWITYLEYLRRRIGQCSDEVEE
EKRLEVIRNTFNRACEYLAKYFGLDGDPNCTILQFWARTEAIHANNMEKARILWADILSQ
GHSATASYWLEYISLERCYGDTKHLRKLLQKALSSVKDWPESIANAWIDFERDEGTLKHI
EFCEAKTKEKLNKVMEDRQKAQQAPFSESSMQNKKANKRKLIPDDIGKWKDLGTFSSKIV
KTDVKVKPKLWKGHLNIGGRIANDTNQEESKQKIAPPPGFKSTEDKDTDDKDTRHEIDNN
VTVFVSNLDYTATEDEIKTALKSVNPITLFKMIKDYKGRSKGYCYVQLSNVEAVEEALKL
DRTPINGRPMFISRCDPNKSTRSSGFKYNSTLEKNKLFVKGLSLVTTKEQLEEIFKVHGD
LKEVRLVTYRNGHSKGLAYVEYHDEATAAKALLSTDGMKIQDKVISVAISQPPDRKKGQM
MEEATGQVRSLGGTITSRTAFGVPKTLLSMIPRNIKTNNGNSSAASNGNGNGQSMNNQDF
RNMFLNKK
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggagatggatgttgcaaatgaagaaaataacgaaaaagcgtttcgaaaagcgtcaaac
gaaattgaagaagagacaatgacgagtgaaacggaagagaaaattatcgagaagatggat
gatgagagtgaatttgacagcgacgacgaggagaatgttgatgaagcggaagtgaaatct
ttacaggcttctttgacagaaaatgcatacgactatgtcagtcacgtaaccctgatcaac
aagttgcagacaatgggcgagttggatcgcctgcgaattgctagagataatatgagcaat
ttgtatccgttgagtcctgaactttggctttcttggatgcgtgatgagatcaagttagcg
atcacaggggagcagaagactgaaatagtaaaattatgcgagagagctgtcaaagattat
gcgtctgtggaagtatggttggaatatttgcagtttactattggaaatatggggacagga
aaagatgcaattaataatgttcgtcaactttttgaacgtgcactaactgctattggattg
catactgtcaaaggtgcaataatatgggaagcttttcgagaatttgaaattgttttattt
gcatcgattgatactgtaaatgtagcagaaaagaaagaacaattgggatgtattggtaac
ttatttcgacgtcaattagcatgtcctctattggacatggataaaacatatgaagaattc
caatcatggcgggtgggagatggtgcggaagcagttatcgatgacaatatcgttttgaga
ggatatgaagaagcttttgcaaaattaaacttacttcttccttatgaagaaaaactcatc
tccgcacaaggtgaaagcgagcttctcgatgcttataaaggatatttactatatgaaaaa
cagcaacacgatccaggacgtattataattctatatgaaagagcaataactgatctgagc
ttagaggtttcaatttggtatgattatcttacttatctggaagatacaataaagattgaa
tccgtgatagatctggtttatcaaagagcgtcgaggaatattccatggtgctcaagaatt
tggcaaaaatggataagattgtatgaaaaatgggaaagatctatattagaaacacaaaaa
ttgttggaggacgctttatctgttggtttctcaacagcggaagaatatcgaaatttgtgg
attacatatctagaatatttgcgacgtagaattgggcaatgttctgatgaagtagaagaa
gaaaaacgtttagaagtaattcgtaatacattcaatagagcatgcgaatatttggctaag
tattttggattagatggcgatcccaattgcaccattttgcagttctgggcaagaactgaa
gcaatccatgcgaataatatggaaaaggctagaatattgtgggctgatatcctttcacaa
ggacattctgcaacagcttcttattggttagaatatatatcgttagaaagatgttatgga
gatacaaagcatttaaggaaattgttacagaaagccttgtcttctgtaaaagattggcca
gaaagtatagcaaatgcatggatagattttgaacgtgatgaaggaactctaaaacacata
gaattctgtgaggcaaaaacgaaagagaagcttaataaagttatggaggacaggcaaaag
gcgcaacaagctcccttcagtgagtcatctatgcaaaataaaaaagcaaataaaagaaaa
ttgatacctgatgatattggcaaatggaaagatttgggaactttttcgtcaaaaattgtg
aaaactgatgtgaaagtaaaaccaaaattatggaagggtcatttaaatattggcggtaga
atcgcgaatgacacaaatcaagaggaatcaaaacaaaaaattgcaccaccacctggtttc
aaatcaacagaagataaagatacagacgataaagatactcggcatgaaatagataataac
gttacagtttttgtcagtaatttagattatacagcgactgaagacgaaataaaaacagct
ctgaagtcagttaatccgataacattattcaaaatgatcaaggattacaaagggcgtagc
aaaggatattgctatgtacagttgagcaatgtagaagctgtagaagaagctttaaaatta
gatagaacgcccataaatggacgtcccatgttcatttctagatgcgatcctaacaagagt
accagaagttccggattcaagtacaactctacacttgaaaagaataaactttttgttaag
ggactttcgcttgtgacaacaaaagagcaacttgaggaaatatttaaagttcatggagat
ttgaaagaagttcgtctggttacttaccgcaatggacactcaaagggtttggcttatgtt
gagtaccacgacgaagcaaccgctgcaaaagcccttttaagtacggatggtatgaagatt
caggacaaagtgatcagtgttgcaataagtcaaccacctgatcgcaagaaaggtcaaatg
atggaagaagccacaggacaagtcaggtcattaggcggaacaataacgagccgtacagcg
tttggagtacctaagactttgctatctatgatacctcgtaatattaaaacgaataacggt
aatagcagtgcagcttcgaatggaaatggaaacggacaatcaatgaataatcaagatttt
agaaatatgtttctcaataaaaagtaa
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