Linepithema humile (Argentine ant): 105678826
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Entry
105678826 CDS
T04898
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105678826 (SMC6)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
105678826 (SMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
RsgA_GTPase
ABC_tran
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
105678826
NCBI-ProteinID:
XP_012233921
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All DBs
Position
6:19022697..19035868
Genome browser
AA seq
1073 aa
AA seq
DB search
MENNVNNRKKRASEKSNEHQTKRSKHIESDDAVTEYTAGKVKKIRVRNFMCHEALEITLN
ENVNFIVGRNGSGKSAILTALTVGLGAKANVTSRGTSIREFIKKGTNNAIIEITLSNKGD
TAYKSEIYGDVITVIRIIGTTYAYKIKNWRGDIISTKREELDNIITTMNIQIDNPISVLN
QDISRTFLVSSKPSEKYNLFMKATLLNTIEKNYNEAREICEEEYKKLKQYSEALSQVRKE
IQKLKENIHRVEEIDASRAELNDLEMELQWAKAIVEESKLCKIQETLKMYEDQLQDLQNM
EASVGTKDEEIDEKIKEVKQKIQQAEQEAIDSSEAFKSAKEKYLAANETYHNKQREWRSA
ANKRKRLEDDINLLKKEIQKLEGCNLEEHNKRREETERLSQLEERLDELGASLRTKQTEL
MHLEADKMRLSQEVQSAKIEIDNSNWRVEKIKKELIAFEQQSDNALSVFGPNIPRLLRRI
EEEYKKGRFKEKPRGPIGAYIKMKDAAWAPAVESYLGSRLLGSFCVDNNQDAKFLNGIMK
EIYYNENFPQIISSKFFHKMHDVRRHCTQSPHHSNLLEAMVIEDPIVANALIDQREIECI
LLIPKSTEACEIMSDRTKVPKNCKRAFTQRGDVFYPDPNYRTYGGRCNGRAKFLQVSTME
AMQTLKEDLQVAENKKQDAIIAHKTVCDKIKRTNSELNHVSTTVGKLKSAQSECTNLINE
LKYKMDSSNATSADVFRNEAAELEKKLAQENAAEKLLAENVKEFQKNVESLNTEVKRCRD
LRHNLNTIIDPLKDQIREFTLQKERHRQKCMRATRKLQEVRQAVQCATGEFEIQERATKK
AVSNATSKYPNRIDTTRSINEIKTLLSDLREKISEVEHQYGTMDDLRKQLREKEEKYGVN
IEFTSKLRESCEKHIKRVKERQKLFIELRDLYSVYVQKSFTDMLSLRQYQGTVVIDHVNK
VLDLSVSARDNKIDNNSNNTRSLSGGERSYSTVAFILALWDCIQLPFYFLDEFDVFMDKV
NRRVIMDILLEHTRTHKQSQFAFLTPLDTSDILAEDYITIHQLEPPERRGLSQ
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataatgtgaataatcgaaagaaaagagcctcggagaagtctaatgagcatcag
actaaacgctctaagcacatcgaaagtgatgatgctgtgacagagtatacagctggaaaa
gtgaaaaagattcgggttcgtaactttatgtgtcacgaagctttggagataacattaaat
gagaatgtcaattttattgtggggcgcaatggcagtggtaaaagcgctatattgacagca
ttaactgtaggacttggtgcaaaggctaatgtgacgagcagaggaacctctattagagag
tttataaagaagggtacaaataatgctatcattgagataacattaagtaacaaaggagat
actgcatacaagtctgagatttatggtgatgtgattaccgttatacgtatcattggaact
acttacgcatacaagattaaaaattggagaggagatatcatctctacaaaacgtgaagaa
ttagacaatattataacaacgatgaacatacaaattgataatccaatatctgttttgaat
caggatatttcgagaacatttctagttagttctaagcctagtgaaaagtacaatctgttc
atgaaagccactctcttaaatactatagaaaaaaattataatgaagctcgagagatatgc
gaagaagaatataaaaaattaaaacaatattctgaggcattgtcacaagtaaggaaagaa
atccaaaaattgaaggaaaatatccatagagtggaagaaatagatgcatcacgtgcggag
ttaaatgatcttgaaatggaacttcagtgggctaaggctattgtggaagaaagtaagctt
tgtaagattcaggaaacgttaaagatgtatgaagatcaattgcaagatcttcaaaatatg
gaggcatctgtgggaactaaagatgaagaaattgatgaaaaaatcaaagaagtgaaacaa
aaaattcagcaagcagaacaggaagcaatagatagcagcgaagcatttaaaagcgcaaag
gagaaatatttggctgcaaatgagacatatcacaacaagcagcgtgagtggcgttcagca
gcgaataaaagaaagcgattagaagatgatattaatttgctaaagaaagaaattcaaaag
ttagaaggctgcaatcttgaagaacataataaaagaagagaagaaacagaacgtctatca
cagttagaagaacgactggacgaactcggagcttccttgcgcacaaagcaaaccgaattg
atgcatttagaagctgataagatgcgactttcgcaagaagtacaatccgccaaaattgaa
atagataattcaaattggcgcgtagaaaagataaaaaaggaattaattgcgttcgagcaa
caatctgataacgcactaagtgtgtttggaccaaatataccgcgtctactgaggagaatt
gaagaggaatataaaaaagggcgattcaaggaaaagccacgtggtcctattggtgcttat
ataaaaatgaaggatgcagcgtgggcgccagcagtggaaagttacctaggttctcgcctt
cttggttcgttttgtgtggataacaatcaagatgccaaattcttgaacggcatcatgaag
gaaatttactacaacgaaaacttcccccaaattatatctagcaagttctttcataagatg
cacgatgttagacgtcactgcactcaatcgccacaccattctaatctgctagaggctatg
gttatagaagatcccatcgtggctaatgccttgatcgatcaacgtgagattgaatgtatt
ctccttataccaaagagtacagaggcatgcgagataatgtcagacagaacgaaagtacca
aagaattgcaagagagcgtttactcagcgaggtgacgtattctatcctgatccaaattat
aggacttacggcggaaggtgtaatggacgcgctaaattccttcaagtttctaccatggaa
gcgatgcaaacactaaaagaagaccttcaggtagcggaaaataaaaagcaggatgccatt
atagcacacaaaactgtatgtgataaaataaaacgtactaattctgaattaaatcacgtt
agcacgacagttggcaagctaaaatccgcgcaaagtgaatgcactaatttgattaatgaa
ttaaaatataaaatggattcgagcaatgctacatcggctgatgtttttcggaatgaagct
gcagaattagaaaagaagttggcgcaggaaaacgccgcagagaagcttcttgctgagaac
gtaaaggaatttcagaaaaatgtagaatctctcaacaccgaggtcaaacgttgcagagac
ttaaggcacaatttaaacacaataattgatcccctcaaggatcaaataagagagtttaca
ctgcagaaagaaagacatcgacagaagtgtatgcgcgccactcggaagttacaggaagtt
cgccaagctgtgcaatgtgcaacaggagagttcgaaatacaagagagagctacgaagaaa
gcggtgtccaatgccacttcaaaatatcctaacaggatagacacgaccagatcgataaac
gaaatcaaaactttgttaagcgatttacgggaaaagatttccgaagtggagcatcagtat
ggcactatggatgatttgcggaaacaattgagagaaaaagaggagaagtatggagtgaac
attgaatttacgtccaagttacgagaaagttgtgaaaaacacattaaacgagtaaaagag
cgacagaagttatttattgaattgagggatctatacagtgtttacgtgcaaaagtctttc
actgatatgctttctctaagacaataccagggcactgtggtgatcgatcacgttaacaaa
gtgcttgacttaagcgttagtgcgcgggacaacaagatcgacaacaacagcaacaacacc
aggtcgctctcgggaggcgagcgatcttactcaacagtcgcctttatcttggccctctgg
gattgcattcaactacctttttattttcttgacgagtttgatgtgtttatggacaaagta
aatcgacgggtgataatggatattcttttggaacacaccagaacgcataagcagagtcaa
ttcgcttttctcacacctttagatacgtcggatattcttgccgaggattatataacaatt
catcaattagaaccaccagagaggagaggtctgagtcagtaa
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