Linepithema humile (Argentine ant): 105679094
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Entry
105679094 CDS
T04898
Symbol
pch2
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lhu03036
]
105679094 (pch2)
Chromosome and associated proteins [BR:
lhu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
105679094 (pch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
nSTAND3
AAA_16
AAA_22
AAA_24
AAA_14
AAA_18
TsaE
Viral_helicase1
AAA_11
RNA_helicase
AAA_7
AAA_30
IstB_IS21
RuvB_N
ORC-CDC6-like
NPHP3_N
AAA_28
TIP49
AAA_33
DUF815
Cytidylate_kin
NACHT
bpMoxR
AAA_2
AAA_5
ATPase
Sigma54_activ_2
AAA_19
ABC_tran
AAA_17
Sigma54_activat
ATPase_2
AAA_25
PhoH
Rad17
AAA_3
Motif
Other DBs
NCBI-GeneID:
105679094
NCBI-ProteinID:
XP_012234315
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Position
2:complement(19159101..19168829)
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AA seq
456 aa
AA seq
DB search
MNKENILHVEICQHANSTLSKETIENIVQAKLKSMEEISLDIVLRGEDLVKNTIKDEMEI
ENHSIEDNFKSDEIIKHHVESVACSSDHLEKGTVKVEGLIFKYYIYRLVYEDGATETMHS
DSDELPVMSHWMLPAKEFHYMWENLYYDCNIKNNLLRFVETTMLFSDLTVNSNIISWNKV
VLLHGPPGTGKTSMCKALAQKATIRLEKRFQYGEFIEINSHSLFSKWFSESGKLVMKLFD
EIKTMVQDEKTLVCILIDEIESLAHARKLCSNGTEPSDSIRVVNALLTQLDQIKRYPNVL
ILTTSNMTQAIDLAFVDRADIKQYLGYPSESAIYSIYHSCLRELMRVGILEDEKIYDISD
LKRQKLFGYTEDSENSVKLLQLSRESEGLSGRILRKIPFLAHALYLSAEKFTMVEFLEAM
HSAISKQNQQDVELREEKVSEVQFCTDSASSSRNRH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaaaacatattacatgtggaaatatgtcaacatgctaacagcactttgtcg
aaagaaaccattgaaaatatagtacaagcaaagcttaagtcaatggaagagatatctctg
gatattgttttacgtggtgaagatttagttaaaaacacaataaaagatgaaatggaaata
gaaaatcactctatagaagataactttaagtcagatgaaattataaaacatcatgttgaa
tctgttgcatgctcttctgaccatttagagaaaggaacagtgaaagttgaaggactcatc
ttcaagtattatatctacagactggtatacgaagatggtgccacagaaacaatgcattct
gattctgatgaattgccagttatgtctcactggatgttacctgcaaaggaatttcactat
atgtgggaaaatctgtattatgattgcaacataaaaaacaacttattgcgttttgtggaa
acaacaatgttattttccgatttgactgttaactctaatattataagctggaataaagta
gtgttactgcatggtcctccaggtacaggcaaaaccagtatgtgcaaagctctagctcaa
aaagctaccattcgtttagaaaagcgcttccagtatggagaattcatagagattaatagt
cacagtctattttcaaaatggttttctgagagtgggaagcttgttatgaagctatttgat
gaaataaaaactatggtccaagatgaaaagacattggtatgcattttgattgacgagata
gaatcattagcacacgcacgtaaattatgcagcaatgggactgaaccatctgattccata
cgcgttgtaaatgcgcttcttacgcaattggatcaaatcaagcgatatccgaatgtttta
atcctcacaacgagcaacatgacacaagctatagatctggcatttgtcgatcgagcagac
ataaaacagtatcttggatatccatccgaaagcgctatttatagcatttaccattcgtgt
ctgagggagttaatgagggttggaattttggaggatgaaaaaatatacgacatatcggat
ctaaaacgtcaaaaactattcggatacacggaagattctgagaacagtgtaaaactattg
caacttagtcgcgagagcgaaggcttgagtggacgtatcttaagaaagataccattttta
gcgcacgctctttatttatccgcagagaagtttacgatggtcgaatttctagaggctatg
cattcagctatatcgaaacaaaatcagcaagatgtcgagcttcgtgaagaaaaagtttct
gaggtccagttttgcaccgattccgcctcctcgtcgcgcaatcgccattaa
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