Linepithema humile (Argentine ant): 105679117
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Entry
105679117 CDS
T04898
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105679117
03041 Spliceosome [BR:
lhu03041
]
105679117
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105679117
Spliceosome [BR:
lhu03041
]
Complex C
Other components
EJC/TREX
105679117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
tRNA-synt_1c_C2
WHD_MCM8
Motif
Other DBs
NCBI-GeneID:
105679117
NCBI-ProteinID:
XP_012234361
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Position
2:complement(19375970..19378297)
Genome browser
AA seq
604 aa
AA seq
DB search
MNMTKKINVNYSSLVGLKAELLRKQAEVNEVKLKTEHINKPSQLNKKRSKKIPTEGVKKN
TKELIDSEDIIAHKKSRLMLEAKTRLYERLKKSKNNNDKFLVDFKNKLDESDEEFVDEAI
NEEHPIEPDENWVEYKDCFGRTRKCLREDLPHMQKKDELIKQEIMKGKTDEDGEEENKEQ
YPIQEKEPEIEIMRRKWEEQTQKLADKVDIHYQDILFDEARTHGVGYYAFSQDEEERAKQ
QENLASLRKETERKQREMKEVKELKERMEQNRLKVARMRQRIRAGLPAELTEEELAQENK
SYVINSTDQINTDKDDDKSVEKDEEISNEETGSNEDPKPTNSKKTNTVSEEETTDEDKIK
AFGELLGKKNHWYVMSQEEWVDKCRTQRISEFGPVYDNFTNAGFYKSDLQDVNEQLTHKE
LDNTEIHNNQESNRESNANLQNHDNNDSTSKEADPVAKDIDSNNQIDKDALTEYNVTSKN
STGYVLPETARKSPSNPATSLSNPLSSQSLQATISYPLSHLSSNYSQNVYSYSESLPPEQ
HKLPCDASDIPLPGEDNVTSSSDNISDNSIYTSKHEELPQGIDEDNIMAGLKYLRERFEE
SYNK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgacaaagaagataaacgtcaactactcatctctagttggtctcaaagcagaa
ctgttaagaaagcaagctgaagtaaatgaggtcaaactaaaaactgagcatatcaataag
ccatcacagctaaataagaagaggagtaagaagattcctacagaaggtgtgaaaaaaaat
actaaggaattaatagattccgaggacattattgcccataaaaagtcaagattaatgttg
gaagctaaaacaagattatatgaaaggttaaaaaaatcaaaaaataataatgataagttt
cttgtcgatttcaagaacaaattagacgaatctgatgaagaatttgtagatgaggcaatt
aatgaagaacatcctatagaaccagatgaaaattgggtggagtataaagactgttttggc
cgtactagaaaatgtttgcgagaagatctaccgcatatgcaaaagaaggacgaattaata
aagcaggaaataatgaagggaaagactgatgaagatggagaggaagaaaacaaagaacaa
tatccaattcaagaaaaagaacctgagatagaaattatgagacgaaaatgggaggagcaa
acacaaaagcttgcggataaagtcgatatacattatcaagatatattatttgacgaagca
agaacgcatggtgttggttactacgcattttcgcaagatgaagaggagagagcaaagcag
caagaaaatttagcaagtttgaggaaggaaacagagaggaagcaaagggaaatgaaagaa
gtcaaggaattgaaagaaagaatggaacagaacagattaaaggtggcaagaatgaggcag
agaatcagagcaggtttgccagcagagcttactgaagaggaactagctcaagaaaataag
tcatatgtaattaattctactgaccaaattaatactgataaagacgatgataaatctgtc
gaaaaagatgaagaaatatctaatgaggaaactggatctaatgaggaccctaaacctact
aattccaagaaaactaacactgtcagtgaagaagagactactgatgaagataagataaaa
gcatttggagaactcttaggcaaaaagaatcattggtatgtaatgtcacaagaagaatgg
gttgataaatgtagaacacaaagaattagcgaatttggacctgtctatgataacttcacg
aatgctggattttacaagagtgatttgcaagatgttaatgagcaattaactcataaagag
ctcgataatacagagattcataacaatcaagaatccaatagagaatctaatgccaatttg
caaaatcatgataataacgattctaccagtaaggaggcggatcctgttgccaaagatatt
gacagtaataatcaaattgataaagacgctcttacagaatataatgtaaccagtaagaat
agtacaggatatgtattgcctgaaactgcaagaaaatcaccatcaaatcctgctacaagt
ttatccaatccattgtcatctcagagtctgcaagcaactatttcatacccattgtctcat
ttgtctagtaattattcacaaaatgtatacagctattctgaatcactcccacctgagcag
cataaattaccatgtgatgcgagtgatattccacttcctggtgaagataatgttacatct
tccagtgacaacatcagtgacaattccatttacacaagtaaacacgaagaattgccacaa
ggtatagacgaagataatataatggccggtcttaaatatttaagagaaaggtttgaagaa
agttataataaataa
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