Linepithema humile (Argentine ant): 105679603
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Entry
105679603 CDS
T04898
Name
(RefSeq) zinc finger CCCH domain-containing protein 18-like isoform X1
KO
K13092
nuclear protein NHN1
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105679603
Spliceosome [BR:
lhu03041
]
Common components
Common spliceosomal components
General mRNP proteins
105679603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
105679603
NCBI-ProteinID:
XP_012235149
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MSDSGSESTSSEGFDGDRNRLAITVEVSSRYSHHSSGSERRKSAASSLSSAGKFPRSPLS
GGDSPRSTPMSPKSQRSGIMSPSEEGSPRSIRSLSKSPSLSSPLSPTSPATPPSHSGNNS
LDSPRSDRSMSRSPVQDNGSCLSPANDSKSMHFADAESKASDLEADAQRSADNSLKSYSY
KNSGSRQSSPKSPRSGPSSVKSLISARSSPKSFKSGPASPMDDQESAAHSPVHSGPRSPE
EEKNGSFHELDSEQISDGDIEDDAEPVCKSKPTPVTHSEDLSDVSDLESIDGPEGSTERN
AEMEKEQGDKQEITNDGENTEKEGKIAPVGLTEESEQLDFEADGQWKDERDEGETETSLA
KESKENAEKDSKDKDKDKAKSKDSGEMNDKEEGEEGEKEESELEEGELSDGDDARPEETE
PRPVCRFYNRGQCTWGVSCRFLHPGVTDKGNYTMFDMVRPMAYPPHAAAPHEYRSHIERP
NMVRSLSGYAAPTHAPKVEEAPTESAWERGLRHAKEMMRKANKRKESDMDFEEKKMNLSL
GQDELDREAGYYVRAASPEPPVERWPQREAPRRVPSSRITPERYIEEPEGYYPPPASSDY
YSRRVHYKESREYRERIDYHAIPRGTHSVSPPPPPPPPPPHNRDRERERDRERERERDYY
EKYEKKHKRPSREVIVERIPPTKPWREEEPPPAERGRGDEWADPWMRRKSPSAVRRKTSS
RRSRRQSYSSGSSYSSTSSSRSSSRSSYSSYDSLSRSRSPSPPSRTRSAGKSKTAVISSP
PANPPTVAATAPQRGAMLMNPPAPSPRPPKGSISPTGTLHRRAGLNPPAPSPSQRHHDKA
REQKTAMAAAAVAKIIKSRSRSRSSHSSSGSESSGSSSDSSESSYSSSSSELRRRKGSTP
PITRKDSKSIDALKLSGAKQQIKLTLKPTSNTTAVKKIDRSALMAGKKRSIESPPMIDSK
AQVAAAAAKAAKKASSRREELLKQLKAVEDAIARKRSKV
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactctggttcagaaagtacatcctcggagggttttgacggggataggaatcga
cttgctatcacggtcgaggtatcgtcgcgttactcccatcactcctcgggttccgagcga
cggaagtccgcggcgagttccttgtcctccgccggaaaatttcccagatcaccgctgtcg
ggcggggactcgccgagatcgactccgatgtcgcccaagtcgcaacgatccggaataatg
tctcccagtgaagagggctcgccgaggtcgatccgtagtttatcgaaatccccgtcgttg
tcgtcccctctctcgccgacgtctccagccacgccgccgagtcattcggggaacaattct
ctcgattcgccgcgatcggatcgcagcatgtcacgatcgcctgtacaggacaacggatcg
tgcctctcgcccgcgaacgactcgaaatcgatgcacttcgccgacgccgagtcgaaagcg
tccgatttggaagcggacgcgcagagatctgccgataattcgttaaaatcgtactcgtac
aaaaacagcggatccagacaaagttcgcccaagtcgcccagatcgggcccgagttccgtc
aagtctctcatatcggcgaggagttcgccgaagtcgttcaaatccggtccggcgtctccc
atggacgatcaagaatcggcggcgcactcgccggtgcattcaggcccgcgctctcccgag
gaagagaagaacggttcctttcacgaattggacagcgagcaaatttcagacggcgatatc
gaggatgatgctgagccggtgtgcaaatcgaaacccactcctgtcacccacagcgaggat
ctgtcagatgtttcggatctcgaaagcatcgacggtcccgagggctccaccgaacgaaat
gcggagatggaaaaggagcagggcgacaagcaagaaatcacgaacgacggtgaaaatacg
gagaaggaaggcaaaattgcgccagtcggcttgacggaggaaagtgaacaattggacttt
gaagcggatggtcaatggaaggatgaacgcgatgaaggtgaaactgaaacgtcactcgcg
aaagaaagtaaggagaatgcggagaaagatagtaaggataaagacaaggacaaagcaaaa
tcaaaagattccggagagatgaatgacaaggaagaaggggaagagggggagaaagaggaa
tcagaattggaagaaggagaacttagtgacggcgacgacgcgcggccggaagaaactgag
ccgagacctgtgtgtcgcttttataatcgcggacagtgcacgtggggtgttagctgtaga
tttctgcatccgggagtgacggacaaaggtaattacactatgtttgatatggtgaggccc
atggcgtacccgccgcacgccgccgcgccacacgaatatagatctcacatcgaaagaccg
aacatggttcgatcgttgtccggttatgccgcaccgacgcacgcaccgaaggtggaagaa
gcgccgaccgaatctgcctgggagcgcggactgcgacacgctaaagaaatgatgcgtaaa
gctaataagcgcaaagaatcggatatggatttcgaggaaaagaagatgaatctgagcctg
ggacaggacgaattggacagagaagcgggatactacgtcagagcggctagtcccgaacca
ccggttgaaagatggccgcagcgtgaagcaccacgcagagtaccgtcctcgagaatcacg
cccgagagatatatcgaggagccggaaggatattatccgcctcccgcgtcatccgactat
tacagcaggagggtgcactataaagagtctcgtgagtatcgagaacgtatcgattatcat
gcgatcccgcgtggcacgcattcagtttctccgccgccaccgccaccgccgccgccgccg
cacaatcgtgaccgagagagggaacgcgaccgtgaacgcgagagggagcgggattactac
gaaaaatatgagaagaagcacaaacggccgtcacgggaggttattgtcgaacgcattcca
ccgacgaagccttggcgggaggaggaaccacctcctgccgaaagaggcaggggcgacgaa
tgggcggatccgtggatgcgacgcaaatccccgagcgctgtacgtcgcaaaacatcgtct
cgccgatcacgccggcagtcctattcttcgggttcttcttactcttcaacgagttctagc
cgtagctccagtcgttctagctacagttcttacgactccctatccaggtcccgttcgcct
tctcctccctctagaacccgttccgctggcaaaagcaagaccgcagttattagttcacca
cccgcgaatcccccgaccgttgcggcgaccgcgcctcaacgcggcgctatgttaatgaat
cctcccgctccgtctcctcgtccgccaaaaggctccatctctcctacgggcacgctgcac
cgacgagccggactgaacccacctgcgccgagcccgtctcagcgtcatcacgacaaagcc
agggaacagaagaccgccatggctgcggctgccgtcgccaagattattaaaagtcgctcg
agatctagatcgtctcatagcagctctggatcggaaagcagtgggagtagcagcgactcc
agcgaatcgagctattcgtcatcctccagcgagctgcgcagaaggaagggctcgacgccg
ccgatcacgcgcaaggactccaaaagcatcgacgctctgaagttgagcggcgcgaagcag
cagatcaaactcacattgaagcctacgagtaacactacggcggtgaagaaaatcgaccgt
agcgcacttatggccggcaaaaagcggagtatcgaatcgccgccgatgattgatagcaag
gcgcaagtggccgcagcggcggccaaggccgcgaaaaaggcgagctcgcgccgcgaagag
ttactgaaacaattgaaggccgtggaagacgcgattgcgcgtaaacggtcgaaggtttga
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