Linepithema humile (Argentine ant): 105679870
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Entry
105679870 CDS
T04898
Symbol
ais
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhu03009
]
105679870 (ais)
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105679870 (ais)
Ribosome biogenesis [BR:
lhu03009
]
Eukaryotic type
90S particles
Helicases
105679870 (ais)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
T4SS-DNA_transf
AAA_22
HEM4
TrwB_AAD_bind
DUF3155
Motif
Other DBs
NCBI-GeneID:
105679870
NCBI-ProteinID:
XP_012235584
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All DBs
Position
1:complement(6769502..6773292)
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AA seq
560 aa
AA seq
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MDTYDLFKKLAVGVKFDTKRFRNDAERFQMVRSNKSDINIKKENIKNEVSAPDVEDTAKR
KHHDDEIEDTVGITLLDGLSGQKDDVPTKKRKKIATADKILKLEQEKINHLRNMNHISVT
GSHIPKLILEFDELKTNYQVSENLLSNMKNCGYIYPTPIQMQAMPIMLEGRHILACAPTG
SGKTAAFLLPIIHTLRGPQKKGFRAVILSPTRELAKQTYRECLRLNEGFDFRIHIISKVN
QALTKYGPSSSQKFDILITTPKRLVFLLNQDPPAISLNNVEWLIVDEADKLFEEGIHGFR
EQLEEITRACSNTDLCRGMFSATNTPAVSKWCRCNMKRLVTVTVGQRNAATDMVDQQLLY
VGSERGKLVAFRNIIQKGLSPPVLVFVQSKERAQELFNELIYDGINVDVIHADRTTTQRD
NIVRCFREGKIWVLICTELMGRGIDFKGVNLVINYDFPSSAISYIHRIGRTGRAGHKGKA
ITFFTQQDTVNLRSIAAVMRASGCDVPDYMLAMKKKHNKKERRKLERTAPARERISTVPT
YKRHKRKSRIEKQSKLEEEA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggatacttatgatctttttaagaaacttgcagtcggcgtaaagtttgatacaaaacgt
tttcgaaacgatgcagaaagatttcagatggtgagatcgaataaaagtgacataaatatt
aaaaaagaaaatattaaaaatgaagtatcagctcctgatgtagaagatacagcgaagaga
aaacatcatgacgatgaaattgaagacactgttggcataacattgctggatggattatca
ggacagaaagatgatgttccaactaaaaaacgtaaaaaaattgcaactgcggacaagata
ttgaagctggaacaagaaaagataaatcatttgaggaatatgaatcacatttcagtcaca
ggtagtcatataccaaaattaatattagaatttgatgaattaaagaccaattaccaagtg
tcggaaaacttgttgagtaatatgaaaaattgtggctatatatatccaacaccaattcag
atgcaagcaatgccaattatgttagaagggagacatatattggcttgcgctccaacagga
tcaggtaaaactgcagcattcttgttacccattattcacacattaagaggaccacaaaag
aaaggttttcgcgcagtgattctaagtcctactagggaattagctaaacaaacatatagg
gaatgcctaagattgaacgaaggatttgattttagaattcacataattagcaaagtgaat
caggctttaacaaaatatggaccatcaagttcacaaaaattcgatattttaattactacc
ccaaagcgattagtttttctcttaaatcaagatccaccagctatttcattaaataatgta
gaatggttgattgtggatgaagcagataaactttttgaggaaggaatacatggatttagg
gagcaattagaagagattacgagagcttgctccaatacagatttatgtcgcggtatgttt
agtgcgacaaacacaccagcagtgtcaaagtggtgtcgttgcaacatgaagagactcgtg
acagtaacagttggacaaagaaatgcagctacagatatggtggatcaacagcttctgtat
gttggtagcgaaagaggcaaattggtggcatttagaaatattatacaaaagggtttatca
ccaccggtcttggtatttgtgcaaagtaaagagcgagctcaagaacttttcaacgagctt
atttacgatggaattaatgtggacgttattcacgctgataggacaacgacacaaagagac
aatatcgtgcgttgttttagagaaggaaagatatgggtcttgatctgtacagagttgatg
ggcagaggcatagactttaaaggtgtaaatcttgttataaattacgattttccgtcatcc
gccatctcctacatccacagaataggtcgcaccggtcgtgcgggtcacaagggaaaggct
ataacgttttttactcaacaggatacggtaaatctacgaagcatcgcagcagttatgcgc
gcttccgggtgtgatgtaccggattatatgttggctatgaagaagaagcataataagaaa
gagcgacgtaaactggagcgtacagcacccgcgcgcgaaaggatatcaactgtgcccaca
tacaagcgacataaacggaaatcgcgcatcgaaaaacaatcgaaactagaggaagaagcg
taa
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