Linepithema humile (Argentine ant): 105680011
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Entry
105680011 CDS
T04898
Symbol
Not3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105680011 (Not3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105680011 (Not3)
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105680011 (Not3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105680011 (Not3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
V-SNARE
FlgM
Motif
Other DBs
NCBI-GeneID:
105680011
NCBI-ProteinID:
XP_012235821
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Position
2:complement(9418561..9427416)
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AA seq
692 aa
AA seq
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MAATRKLQGEIDRCLKKVSEGVETFEDIWQKVHNAANSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
KDEVTNWLANSIDALNLQMDTFESEIESLQAGKKKRIDKDKQDRVDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSCTSPIPSPSLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNTQASIPTTGSTATIKSNMLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHSNSQAIHSTSNKTSISLDFTAHNSENNLLSSSTSNVTSSVPQTVTQQHNNNPAPA
QTTHVLHSQQNQNHSSETEMTTPVPPSSSPQSSVSSRSSPMPANSCSPAPSTANGLIPKL
PDGSMSSLKSIAQQVIVRAGLEIPPSEPNRNIFDSAKTNNNNNTNATSEAHIPPLLGVAP
LGPVPLQKEHQVQFQMMESAYYHMPHPSDSERLRSYLPRNTCSTPPYYQQVQLPHSDTVE
FFQRLSTETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQ
GTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaaggaagttgcaaggtgaaatagatcggtgccttaaaaaagtatcagag
ggtgtagaaacctttgaagatatttggcaaaaagtccataatgccgccaacagcaatcag
aaggagaaatacgaggctgatctcaaaaaggaaatcaagaaacttcaaaggttacgcgat
caaattaagagctggattgcgtcgggtgaaataaaagacaagagtacacttcttgattac
cggaagttaatcgaaactcaaatggaaagatttaaagttgttgagagagaaacaaaaaca
aaggcttattcgaaggagggtttaggtgcagctcaaaagttagatccagctcagaaagaa
aaagacgaggttactaattggttagccaattccatagacgctctcaatctccagatggat
acgtttgaatcggaaatagaatcgttacaagcgggaaaaaagaagaggatagacaaagat
aagcaagacagggtggacgaattgaaagcgaaactcgataaacaccgttaccacattcgt
aaattggaaacattgttacgaatgcttgataacatgtctgtcgaagtcaacacaattaaa
aggataaaggacgatgttgagtattatattgaatcttcgcaagatcccgattttgaggaa
aacgagtatatttacgacgatattatcggcctcgatgaagtcgagttgtccggagtcggc
atcccctcgtcagcaacgacggacagtaacaacagcaacgaaaccgggggtacgccgact
tcgactaattcttgtacttcgcctataccatcgccatcattaagctctactatgcataat
cactcgagcgatagctctacagataatgacaagaaaacaaagcctgtgaaaccgacagca
gtcaggccgctattgaatacgcaagcgagcattccaaccacgggaagcactgccaccata
aaatcgaatatgttatcgagcagcactccaagcaaaaccattcccatgacgcctagccac
agctcgcctagttctacgagcaatcacattgccacgactaacgctggcaactttgccacc
gtagctgcctcgcacagcaattcacaagccatccattctacctctaataaaacatccatc
tctctcgattttacagcccataacagcgaaaataatcttttgtcatcgtctacgtccaac
gtcacgtcgagtgtgccgcaaacggtcacgcagcagcacaacaataatccggcgccagca
cagacgacgcacgtactgcacagtcagcagaatcagaatcatagtagcgaaacggaaatg
acgacgccagtaccgccatcctcgtcgccgcagtcgtcggttagcagtagatcctcgccg
atgcccgcaaactcctgctcgccagcaccgtccactgccaatggtcttatccctaagctt
cctgacggaagcatgtcctctctaaaatccattgcccaacaagtaattgtccgagcaggt
cttgagataccgccttccgagccgaacagaaacatcttcgacagtgccaagacgaataac
aacaacaacaccaacgccacgtcggaagcacacattcctcccttgcttggggtcgcgccc
ctcggacccgtgccgttgcagaaggaacaccaggtgcagttccaaatgatggaatccgcc
tactatcacatgccacatccgtctgactcggaaagactacgttcgtacctgccgagaaac
acctgctcgacgccaccctattatcagcaggttcagcttccccattcagataccgtggag
ttcttccaacgcctttctacggaaactttattcttcatattttattacatggaggggtct
aagggacagtacttggcggcgaaggctctgaaaaaacagagttggaggtttcacaccaag
tacatgatgtggttccaaaggcacgaggaaccgaaagtcattaatgaggaatatgagcag
ggaacgtacatctattttgactacgaaaaatgggggcagaggaaaaaagaaggatttact
ttcgagtacaagtacttagaggacagagacctgaactaa
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