Linepithema humile (Argentine ant): 105680070
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Entry
105680070 CDS
T04898
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
lhu
Linepithema humile (Argentine ant)
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105680070
03110 Chaperones and folding catalysts [BR:
lhu03110
]
105680070
Enzymes [BR:
lhu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
105680070
Spliceosome [BR:
lhu03041
]
Complex C
Other components
PPlases
105680070
Chaperones and folding catalysts [BR:
lhu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
105680070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_EML
WD40_Gbeta
Beta-prop_Vps41
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
105680070
NCBI-ProteinID:
XP_012235927
LinkDB
All DBs
Position
1:complement(39021887..39025029)
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AA seq
611 aa
AA seq
DB search
MSSKREHEGSDTEDGWIGPLPSEAAPQKKQRVLEYEQVYIDNLPCCECYEKSYMHRDVIT
HILVTKSNFVITASCDGHIKFWKKQEELIEFVKHFRAHLMAIQSMSASCNGVHVCSVSID
KAMKIFDVINFDMINMIKLDFVPLCAEWIYSAGDAISAVAVSSQESNKIYIYDGQGTNTP
LHIFEKLHTKPVVIMKYNPVYETCISVDRAGILEYWTGPKMEYKFPKCITFESKLDTDLF
EFAKNKTYPCGLAVSPDGKRFASFSGDRKVRVFNFRTGKLYRIFDETLQRFSELQQTVQQ
LPNMEFGRRMAVERELDKTETNLGNIIFDESGYIILYPTMLGVKMVNLYTNRCIKIMGKP
ENIRPTQLALFQGKARKTTAALTVEMEASENPTMELNRPDPTLFCTAHKKNRFYMFSRRE
PEDTKSQECDRDVFNEKPSKEDIISSTEATNMQKIYDTAIIHTALGDIHVNLFGKDVPKT
VENFCVHAKNGYFNGHIFHRIIKGFMIQTGDPTGTGTGGESIWGGEFEDEFKPNLKHDRP
YTLSMANAGANTNGSQFFITLTPTPWLDNKHTVFGRVHKGMEVVQNISQVKTNPKTDKPY
DDIRIVSVTVK
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaaacgtgaacacgaaggaagtgacacagaagatggttggattggaccatta
ccttcggaagctgcaccacaaaagaagcaacgagtcttggagtatgaacaagtctatata
gataacttaccatgttgcgaatgctatgagaagtcttacatgcacagagatgttattact
catattttagtaacaaaatcaaactttgtgataactgctagttgcgatggacatataaaa
ttttggaagaaacaagaggaattaatagaatttgtaaaacattttcgggcacacttaatg
gcaatacagtcaatgtctgcaagttgcaatggtgttcacgtgtgctcagtcagcatagat
aaagctatgaaaatatttgatgttattaattttgatatgataaatatgataaaattggac
tttgtgccactttgtgctgaatggatatattcagctggtgatgccatatctgctgtggca
gtgtcttcacaagaatcgaacaaaatatacatttatgatggccaaggaacaaatacaccc
ctacatatatttgaaaaactgcacactaaacctgttgtcattatgaaatataatcctgtg
tacgagacgtgtatttccgtcgacagagcaggaatattggagtactggacgggtccaaaa
atggagtacaaatttcctaaatgtataacattcgaatcaaagttggacacagatctgttt
gaatttgccaaaaataaaacttacccgtgcggcttagcggtctcgcctgatggcaaacga
tttgcatccttcagcggagatagaaaagttagagtttttaatttccgaacaggcaaactt
tataggatattcgacgagacgctacaaagatttagcgagttacaacaaactgtacagcaa
ctaccgaacatggaatttggacggagaatggcggtcgaaagagaattggacaaaaccgaa
acgaatttgggaaatatcatttttgacgaatctggttatattattttatatcctacaatg
ctgggcgttaaaatggtgaatctttatacaaaccgttgtattaaaattatgggaaagccg
gaaaatatacgaccaacacaactagcattattccagggaaaagcgaggaaaacaactgct
gcgttaactgtcgaaatggaggcttctgagaatcccacgatggagttgaaccggcctgac
ccgacgttgttttgcacggcacacaagaaaaatcgattttacatgttttcgagacgagaa
cccgaggatacgaaaagtcaggaatgcgatcgggatgtcttcaatgaaaagccttctaaa
gaagatattatatcttcgacggaggccacgaatatgcaaaagatatacgacacggcaatc
attcatacagcgcttggcgatatccacgtcaatctcttcggcaaggacgtacccaagact
gtggaaaatttctgtgtacacgcgaagaacggttactttaacggtcacatatttcatcga
attatcaagggcttcatgattcaaacaggcgatcctaccgggaccggcaccggcggtgaa
agcatatggggcggcgagttcgaggacgaattcaagccgaacttaaagcatgatagaccg
tatactttgagcatggctaacgcaggagcgaatacgaacggtagccaattcttcattaca
ttgacaccaacgccttggttggataacaaacataccgtgttcggccgagtccataaagga
atggaggttgtacaaaatattagccaagtgaagacgaatcctaaaactgataagccttac
gacgacatacgaatagtcagcgtgactgtaaaatag
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