Linepithema humile (Argentine ant): 105680111
Help
Entry
105680111 CDS
T04898
Symbol
hfp
Name
(RefSeq) poly(U)-binding-splicing factor half pint isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105680111 (hfp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lhu03041
]
105680111 (hfp)
Spliceosome [BR:
lhu03041
]
Complex A
U2 snRNP components
U2 related factors
105680111 (hfp)
Complex B
105680111 (hfp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
105680111
NCBI-ProteinID:
XP_012235985
LinkDB
All DBs
Position
1:8790883..8799321
Genome browser
AA seq
591 aa
AA seq
DB search
MNGTMAMAPTSQNNLEPPAKKSKVEGSASEFLPGPIYDLNQIGQVVAGPGAKYLTLPGIL
GAGLPKISSEQQDTVNRAKKYAMEQSIKMVLMKQTLAHQQQQMASQRNQVQRQQALALMC
RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ
MNGVMIGGRNIKVVGRPSNMPQAQSVIDEITEESKHYNRIYIASIHQDLTEDDIKSVFEA
FGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITPPNA
LMGPPSGTSMMPTAAAVAAAAATAKIQAMDAVASNAVALGLTKLGATAPPILNQALPGVR
PTIAPATMMAPPTVATVAPVIPPPGIAIPQTLTRPPAIIQPIPGQPVVIPPPAVVAPTIV
GTPVIPVTTTANSDIMRRAQEQAAHQKQQEELQKKLLEETEPQTLQQQENMSIKGQSARH
LVMQKLMRKVESRVVILRNMVAPEDVDETLQEEIQDECSKFGVVERVIIYKERQSEDDEN
AEVIVKIFVEFSQMSEAERARDSLNGRYFGGRLVKGELYDQALFDNSDFSG
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaacgatggccatggcaccaacatcacaaaataatctggagccaccagcaaaa
aagagcaaagtagaaggaagtgcatcagagttcttaccaggccctatatatgatctcaat
caaataggccaggttgttgctggacctggtgctaaatatctaacattacctgggatatta
ggagctggcctaccgaaaatttcatccgaacagcaggatacagtaaatagggcgaagaag
tatgcgatggagcaaagtatcaagatggtcctcatgaagcaaacattggcccatcaacaa
cagcaaatggctagtcaacggaatcaggttcaacggcagcaggcactcgcgcttatgtgc
agggtttatgtgggcagcatcagttttgaattgaaagaagacacgatcagacaagccttc
ttgccattcggaccaatcaagtctatcaatatgtcttgggatcctgttacacaaaaacac
aagggatttgcttttgttgaatatgagatacctgaagccgcgcaactcgctttggaacaa
atgaacggtgtcatgattggtggccgcaacatcaaggttgtaggacgtccgtccaatatg
cctcaagcgcaatctgtgatcgatgagataaccgaggagagtaaacattacaatcgcata
tatatagcgtcgatacatcaagacttgacggaggacgatattaaatccgtcttcgaggcg
tttgggccgataacgtactgtaagcttgcgcaaggcagctcgccgcaccgtcacaaaggt
tacggttttattgaatacgagacaatgcaagcggcattggaggctatcgcctccatgaac
ctgttcgatctgggcggtcaatatctaagagtaggtagagcgataacaccaccgaacgcg
cttatggggccgcctagtggtaccagcatgatgcctaccgcggctgcagtggctgcggca
gctgcaacagcaaagattcaagcgatggacgctgttgctagcaatgccgttgcgttgggt
ctcacaaaacttggagccaccgcaccaccgattctgaatcaagcactaccaggcgtacgg
cctactattgcacccgcaacaatgatggcaccaccaacagtagcgacggtggcaccagta
atacctccacctggcatagctataccgcaaaccttaacgcgaccaccagccatcatccaa
ccaatccccggtcaaccagtagtcataccacctcccgcagttgtcgctcctacgatcgtc
ggcacaccagttataccggttacaacaaccgcaaattccgatattatgaggcgagcgcag
gaacaagcagctcatcagaaacaacaggaggagctgcagaaaaagttgctagaagaaaca
gaaccacagacgttacaacaacaagaaaatatgtcgatcaaaggacagagcgcgcgtcat
ctcgtcatgcaaaaacttatgcgtaaagtcgagtcccgagttgttattttgagaaacatg
gtagcaccggaggatgtagacgagactctccaggaagagattcaggacgaatgttccaaa
tttggtgtggtcgaacgagttattatttataaggagagacaatctgaagacgacgaaaat
gccgaagttatcgtgaagatattcgtcgaattctctcaaatgagtgaagcggaacgtgca
agagattcgttaaatggtcgttattttggtggacgattagttaaaggagaactatacgac
caagccctatttgacaatagtgatttttccggttga
DBGET
integrated database retrieval system
