Lactobacillus helveticus CNRZ32: lhe_0640
Help
Entry
lhe_0640 CDS
T02744
Name
(GenBank) TrmA family RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lhv
Lactobacillus helveticus CNRZ32
Brite
KEGG Orthology (KO) [BR:
lhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhv03009
]
lhe_0640
Enzymes [BR:
lhv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
lhe_0640
Ribosome biogenesis [BR:
lhv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
lhe_0640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_15
Cons_hypoth95
Methyltransf_31
RrnaAD
DOT1
Met_10
MTS
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
AGQ23181
LinkDB
All DBs
Position
complement(729255..730622)
Genome browser
AA seq
455 aa
AA seq
DB search
MEKNQIIDLEITDLSYEAMGVAHYNGMTVFVTNALPGEVVSAKILKVKKNFAFAKIEKIK
KESPDRVNVKLNQGVQSGLASLAHIKYDKQLDFKRNQVVNLLKKAHLENIEVGETLASPE
EVGYRNKAQVPVREVNGQLEIGFFRRHSHDLMPLTHFFTTDPEIDRVLVAVRDILRKYKV
PAYDEINNNGEVRYLEVRRSKSTGEMMVILVCLHKDFMQLPNVAAEVSQIPGVSGLILNH
NPKKTNVILGPKDYLVFGNDQITDQIGDLKFRISPQSFFQINSLQTPRLYNLAIKQADLK
PDDVVIDAYSGIGTIGLSVAKHVKAVRGIEVVRDAIKDAKDNAKLDNAKLNDITNAKYYL
GKAEEIMPRWAKSGLKTDVVFVDPPRKGLTPEFINAAVKTGPKKIVYISCNPATLVRDLQ
LFQEKSYEFNRIDPVDMFPQTPHVESVTVLERTEK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatcaaattatcgatttagagattactgatctttcatatgaggcaatgggt
gttgcccattacaatggaatgacagtatttgtaactaatgctcttccaggagaagtagtt
agtgccaaaattttaaaagttaagaagaactttgcttttgctaaaattgaaaagatcaaa
aaagaaagccctgaccgagtaaatgttaagttaaatcaaggggtccaatcaggcttggct
tctcttgctcatattaaatatgataagcagcttgattttaagcgtaatcaagtggttaac
ctccttaagaaagcccatcttgaaaatattgaagtgggggaaactttagctagtcccgaa
gaagtaggttatcgtaataaggcgcaagttcctgtgcgtgaagtaaatggtcaactagaa
attggcttctttagacgtcattcacatgatttgatgcctttgacccacttctttaccact
gatcctgaaattgatcgcgtgttagtagcagtaagagatatcttgcgtaaatacaaggta
cctgcttatgatgagatcaataataatggtgaggtgcgttaccttgaagttcgccgtagt
aaatcgactggcgagatgatggtaattttagtttgcttgcataaagattttatgcaatta
ccaaatgtagctgcagaagttagtcaaattccaggtgtttctggcttgattctaaatcat
aaccctaagaagactaatgtcattttagggccaaaggattatttggtctttggtaatgat
caaattactgaccaaattggagacttgaagtttagaatttcacctcaaagtttcttccaa
attaactctttgcaaacgccacgtttgtataatttagcaatcaaacaggctgatttgaag
ccagatgatgtagtaattgatgcttattcaggtatcggaactattggattaagcgttgct
aagcatgttaaggctgtgcgaggaattgaagtagttcgggatgcgatcaaggatgccaaa
gataatgctaagcttgataatgctaagcttaatgatattactaatgctaagtattattta
ggcaaggcagaagaaattatgccacgttgggctaagagcggcttaaagacagatgtggta
ttcgttgatccgccaagaaagggattaactcctgaatttattaacgctgctgttaagaca
ggacctaagaagattgtttatatttcatgcaatccagcaacattggtgcgtgatttgcaa
ttgttccaagaaaaaagttatgaatttaatcgaattgatcctgttgatatgttcccacag
actccacatgttgagagcgtaacggtcctcgaacgtacagaaaaatag
DBGET
integrated database retrieval system
