Lactobacillus helveticus CNRZ32: lhe_1032
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Entry
lhe_1032 CDS
T02744
Name
(GenBank) excinuclease ABC subunit A-like protein
KO
K03701
excinuclease ABC subunit A
Organism
lhv
Lactobacillus helveticus CNRZ32
Pathway
lhv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lhv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
lhe_1032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhv03400
]
lhe_1032
DNA repair and recombination proteins [BR:
lhv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lhe_1032
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
lhe_1032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
DnaJ_CXXCXGXG
nSTAND1
AAA_21
AAA_15
AAA_29
RsgA_GTPase
ATPase
DUF463
nSTAND3
cobW
DUF4350
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-ProteinID:
AGQ23535
LinkDB
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Position
1196412..1198916
Genome browser
AA seq
834 aa
AA seq
DB search
MALPKQIEVRGAKVHNLKNIDVNILLHKFVAISGLSGSGKSSLAMGILYEEGSRRYLDAL
STYMRRRIKQGAQADVTSVKHIPSALALRQRPSVPNERANVGTTTETFNVLRLIFSRLGS
PICPNGHRVAPSLAIAEAMSKSGEEMGRITCPTCGVKFYVPSAEEFAFNSDGACTECGGT
GKVRQLDENKLIADENLSIEDGAVASWSLPGRNFMPSVAEHAGVRINVPFKDLTDKEKDF
VLNGPEKKYKMDFLSGTGRVFHDFNALYENAHQAVLRSAKSSKSERAQKRIAEFFTYSTC
PVCHGTRLRPELLKQLVNGKNIDEVEHMQLGDLPAWSKEVLAKLPEEMHQMASLLIKEFI
NNLQPLLDLGLDYLTMARAGNTLSTGELQRIQLARTLRTETTGVLYVLDEPSIGLHPANV
DGLIKVLRKLVDQGNSLVVVDHNVDIIKAADEIIEIGPGSGEQGGQILAQGTPRELEDNK
KSLIAPYLNGKADLMARKTTDKINSDQIKFEIEHYFNLHDIKAGIPVNQITAVTGFSGAG
KTSLILDSLVPAIEAQAKGEKLPKQIKKFSSPVHNVVSVDATPIGKSTRSTVATYTSIMD
NLRKLFARQPLAKEKHYTPSYFSYNNKEGACPTCGGTGIVTLDIQFLPDMQQTCPTCHGE
RYNPAIQQVKWHGMSIVDVLNLDINEALPVFKKAPKIERELKLLKEVGLDYLHLGESTPT
LSGGEAQRLKLVTHLSHKQDDTLFVFDEPTIGLHPLDVKVLVTVMQKLLDQGATILTITH
DLNLIVNSDYILDLGPHGGKAGGRIVAEGMPRELVKHPDSLTTRYLADYWKQFE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcattaccaaagcaaattgaagttagaggagcaaaagttcacaacttaaaaaatatt
gacgtcaatattctgctgcataagtttgtagctatttcaggattgtctggatcggggaaa
tcatccctagctatgggaattctttatgaagaaggatcgcgccggtatcttgatgcactt
tctacatatatgagaagacgaattaagcagggggcacaagctgatgttacttcggttaag
catattccgtcagcattggctctgcgtcagcgtcccagtgttcctaatgaaagagcaaat
gttggtacaacaactgaaacttttaatgtcttgcgcttgattttttcacgacttggttca
cctatctgtcctaatggtcaccgagttgcaccaagtctggcaatagctgaagcaatgtcg
aaatccggcgaagaaatgggacgaatcacttgtccaacttgtggcgtaaagttttatgtc
ccaagcgctgaagaatttgcatttaattcagacggtgcatgtactgaatgtggcggtaca
ggcaaggtgcgtcaacttgatgaaaataaattgatcgctgatgaaaacttatcaattgaa
gacggcgcagttgcttcgtggtccttaccagggcgtaatttcatgcctagtgtggcagag
catgcaggagttcgtatcaatgttccatttaaagatttaactgataaagaaaaagacttt
gtcttaaatggtccagaaaagaaatataagatggactttttatcaggcactggccgtgtg
tttcatgactttaatgctctttatgaaaatgctcaccaggcagttcttcgttcagccaag
agtagcaagagtgaacgtgcacaaaagagaatcgccgaattcttcacttattcaacttgt
cctgtttgtcatggtacacggcttcgtcctgaattactcaagcaattagttaatggcaag
aatattgatgaagttgaacatatgcaactaggtgatttgcctgcttggagtaaagaagtt
ttagccaaattaccggaagagatgcaccagatggcatctttattgatcaaggaatttatc
aataatttgcagccattgcttgatttgggcttagattatttgactatggctcgagcagga
aatacactttcaaccggtgaattgcaacgaatccaattggccagaactttaagaacagaa
actactggcgttctttatgtattagatgaaccatcaattgggctccatcccgctaacgtc
gatggtttgattaaggttttgcgcaaattagttgatcaaggcaattctttggtcgtggtt
gatcataatgtcgatattattaaggcagccgatgaaatcatcgaaatcggaccaggatct
ggtgaacaaggtggtcaaattctagctcaaggtacgcctcgagaattagaagataataaa
aaatctttgattgcaccatatttaaatggtaaagctgatttgatggcaagaaaaacgact
gataagattaatagcgatcaaataaaatttgaaatagagcattatttcaacttacatgat
attaaagctggtattccagttaatcaaattactgcagtgacaggcttttctggagcaggt
aagaccagtttgattttggattccttagttccggctattgaggcacaggcaaagggcgag
aagttacctaaacaaattaagaaattctcttcaccggttcataatgtagttagtgttgat
gcgactccgattggtaagagtacccgttcaactgtagcaacatatacttcaatcatggat
aatctgcgtaagctttttgctcggcagccactagcaaaagaaaagcattacacgccaagc
tacttctcttataacaataaagaaggagcttgcccaacttgtggtggaacgggaattgtg
acgttagatattcaatttttgccagatatgcagcagacttgtcctacttgccatggtgaa
cgttataatccagcgattcaacaagtaaagtggcacggaatgtcaattgttgatgtgctt
aatttagatattaatgaagcactacctgtgttcaaaaaggcaccgaagattgaacgagaa
ttgaaattgttaaaagaagtcggtttggattacttgcatttaggtgaaagtacaccaact
ttatctggtggtgaagcacaaagattgaagctggttactcatttgagtcataagcaagat
gatactttgtttgtcttcgatgaaccaacgatcggtttgcatcccttagatgtgaaggtt
ttggtaaccgtaatgcaaaaattgcttgatcaaggtgcaaccattcttacaatcacacat
gatttgaatttaattgttaatagcgattatattttggatctaggaccacacggcggtaaa
gctggtggtagaatcgtggctgaagggatgccacgagaattagtcaagcatccagatagt
ttaactacacggtatttggctgattattggaagcaatttgaatag
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