Lactobacillus helveticus CNRZ32: lhe_1664
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Entry
lhe_1664 CDS
T02744
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lhv
Lactobacillus helveticus CNRZ32
Brite
KEGG Orthology (KO) [BR:
lhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhv03019
]
lhe_1664
03009 Ribosome biogenesis [BR:
lhv03009
]
lhe_1664
Enzymes [BR:
lhv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
lhe_1664
Messenger RNA biogenesis [BR:
lhv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
lhe_1664
Ribosome biogenesis [BR:
lhv03009
]
Prokaryotic type
rRNA helicases
lhe_1664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGQ24067
LinkDB
All DBs
Position
complement(1921625..1922986)
Genome browser
AA seq
453 aa
AA seq
DB search
MNNIFADSRIRPAIQEGLKKIHFEKPTKVQEKVIPAMLSELRVVVQAATGSGKTHAYLVP
IFNEIDEDAHYVQAIVTLPSRELADQLYQVARQLRDAAGMHFSIAHLAGGTDRERQLEKY
QNNTPQLVIATPGRLLDFVQKKVLVVDQVKTFVIDEADMTLDMGFLADIDQVASKMPKDV
QIAAFSATIPVKLSNFLRKYMAHPDQIVIDNPSVIAPTIKNDLLDIGSKNRKSVLYKLLT
MGQPYLALVFANTKQTVDELTRYLQDQGLKVAKIHGGVTERERKRTLRQVEQGQFQYVVA
SDLAARGLDIDGVSLVINYEIPRDIEFVIHRIGRTGRNGLSGHAITLICEEEMNRIEDLE
KMGVHFDFVEIKNGELVPRKHYRSRENRQGKNHKFDTKLVGYVKKEKRKRKPGYKKKIKR
AIQEDNRQKRKLEQRHEIRKAKRLRKRKREQGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattttcgcagattccagaattagaccagctattcaagagggtttaaagaag
atccattttgaaaagccaactaaggtgcaggaaaaagttattccagcaatgctttctgag
ttaagggttgtggtgcaagctgcaaccgggtcaggtaagacgcatgcttatttggtgcct
atctttaatgaaattgatgaagatgctcactatgtgcaagcaattgtgactttgcctagt
cgagagcttgctgatcaactttatcaagtagcacgtcaattaagagatgcggcagggatg
cacttttctattgcccaccttgctggtggaacggaccgtgaacgtcagttagaaaagtac
caaaataatacgccacagttggtaattgccactccgggacgacttttggactttgtacaa
aaaaaggtactcgttgttgatcaagttaagacttttgtcatcgacgaagctgatatgact
cttgacatgggctttttggctgatattgatcaagtagcaagcaagatgcctaaggatgta
caaattgcagccttttcagccactattccagttaagctatctaactttttgcgtaagtac
atggctcatccagatcaaatcgtgatcgataatccgagtgtcattgcacctacaattaag
aatgatttgcttgatattggctcgaagaatcgtaagagtgttttgtacaagttattgact
atgggtcaaccttacttggctttggtttttgctaatacaaaacaaactgttgatgaatta
actagatacttgcaagatcaaggcttaaaggtagctaagattcatggtggggtaactgag
cgagaaagaaagcggactttgcgtcaagttgagcaaggacaatttcaatatgttgttgcc
tctgacttagcagcccgtggtcttgatatcgatggtgttagtttagttattaattatgaa
attccacgtgatatcgaatttgtaattcaccggattggtcgtaccggccgtaatggttta
tcaggtcatgcgattactttaatttgtgaagaagaaatgaaccggatcgaagatttggaa
aagatgggcgttcatttcgactttgttgaaattaagaatggtgaattagtaccacgtaag
cattaccgcagtcgtgagaatcgtcagggtaagaatcacaagtttgatactaagttagta
ggttacgttaaaaaggaaaaacgtaagcgtaagcctggctacaagaagaagattaagcga
gcaattcaagaagataatcgtcaaaagcgtaagcttgaacaacgtcatgaaattagaaaa
gctaagcgtttgagaaagcgtaagcgtgaacaaggacgttga
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