Lactobacillus helveticus CNRZ32: lhe_1764
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Entry
lhe_1764 CDS
T02744
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lhv
Lactobacillus helveticus CNRZ32
Pathway
lhv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
lhe_1764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhv03021
]
lhe_1764
03400 DNA repair and recombination proteins [BR:
lhv03400
]
lhe_1764
Enzymes [BR:
lhv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
lhe_1764
Transcription machinery [BR:
lhv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
lhe_1764
DNA repair and recombination proteins [BR:
lhv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
lhe_1764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AGQ24156
LinkDB
All DBs
Position
complement(2031306..2032244)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITVVEQEDSYGKFVVEPLERGFGTTLGNSLRRVLLTSIPGTGLVYVQIDGVL
HEFSTVPGVREDVTKIILNLKKLELKSLSDERKVIELDVEGPATVTADDLKVDADVQVLN
PDQYICTIAEGGHLHMEIAVQNGRGYVAASDNKSDDMPIGVIPVDSLFSPIKKVNYQVES
TRVGKRDDFDKLTFEIWTDGSIKPNDALSFATKILVEHFKVFESADADTKFSEVMVEKED
DKKEKKLEMTIEELDLSVRSYNCLKRAGINTLQELTDMTESDMMRVRNLGRKSLEEVKNK
LTDLGLSLRQED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaatattaccgttgttgaacaagaagattcttacggtaag
tttgttgttgaaccacttgagcgaggctttggtactactttaggtaactctttaagaaga
gtcttacttacttctattcctggtactggacttgtttatgtgcaaattgatggtgtttta
cacgagttctcaacagttcctggcgtcagagaagatgtaaccaagattattcttaatttg
aagaagcttgaattaaagtctctttcagatgaaagaaaggttattgaattggacgttgaa
ggtcctgccacagtaactgctgatgatcttaaagttgatgcagacgttcaagtcttaaat
ccggatcaatacatttgtaccattgctgaaggtggacacttgcacatggaaatcgccgta
caaaatggtagaggttatgttgctgcaagtgacaataagagtgatgacatgccaattgga
gtaattcctgttgattctctattctcaccaattaaaaaggttaactaccaagttgaatca
actcgtgttggtaagagagacgattttgacaagctcacttttgagatttggactgacggt
tcaatcaagcctaatgacgcccttagttttgctactaagattttagttgaacatttcaaa
gtatttgaatcagctgatgcagatactaaattcagcgaagtaatggtggaaaaggaagac
gacaagaaagaaaagaaactcgaaatgacaattgaagagcttgatctttctgttcgttca
tacaactgcctgaaacgtgccggcattaacactcttcaagagttaactgatatgacagag
tcagatatgatgcgtgtacgtaacttgggacgtaaatcattggaagaagttaagaataaa
ttaaccgacttaggtctttcacttcgtcaggaagactaa
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