Lactobacillus helveticus CNRZ32: lhe_1795
Help
Entry
lhe_1795 CDS
T02744
Name
(GenBank) DNA-directed RNA polymerase beta prime subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lhv
Lactobacillus helveticus CNRZ32
Pathway
lhv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
lhe_1795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhv03021
]
lhe_1795
03400 DNA repair and recombination proteins [BR:
lhv03400
]
lhe_1795
Enzymes [BR:
lhv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
lhe_1795
Transcription machinery [BR:
lhv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
lhe_1795
DNA repair and recombination proteins [BR:
lhv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
lhe_1795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AGQ24187
LinkDB
All DBs
Position
complement(2050199..2053852)
Genome browser
AA seq
1217 aa
AA seq
DB search
MIDVNKFESMQIGLASPNKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWSC
ACGKYKGVRYRGIVCDRCGVEVTSSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDI
SPRLLEEVIYFAAYIVIDPGDTDLEPKQLLTEAEYREQKAKYGNRFEAKMGAEAIRELLK
KVDLDKEVKDLKKELQTATGQKRTRAIRRLDILDTFKNSGNKPEWMVMDAVPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVVGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVSPKLKFYQCGVPRP
MALELFKPFVMHELVKRGIASNIKNAKRKIDREDDDIWDVLEDVIKERPVLLNRAPTLHR
LSIQAFEPVLVPGKSIRLHPLACEAYNADFDGDQMAIHVPLSDEAVAESRLLMLAAHHIL
APKDGKPIVTPSQDIVLGNYWLTQAERGREGEGMIFSSPAEATVAYENGDIHYHTIIGMS
ADAMPKKPWPQGHEHGIFITTYGKLVFNQLFPDDYFYINEPTEENLNNPLDAKYFLGEGQ
DIHDKIDEVGDDLIATPFKSGFLSDSIATIYKYYKVQRTSEYLDDLKKLGYTSSTTSGIT
IGMNDVPEIKDKDEKVAKARKQVDIVSKQFRRGLITEQERHDRVISIWNACKDEIQNEIA
QIHSPRNPISIMADSGARGNISNFTQLAGMRGLMATPNGGLFEIPVTSNFKEGLSVLELF
MSTHGARKGMTDTALKTAQSGYLTRRLVDVAQDVIIRDDDCGTDRGITVSAIMEGDEMIE
PLFDRLVGRFTAETVKDPKTGEAIVGRDVMMDENMAHKICDAGVTHVKIRSILTCDTPHG
VCRKCYGMNLATGEEVEVGEAVGTVAAQSIGEPGTQLTLRTFHNGGVAGAEDITQGLPRV
QELFEARNPKGRATISEVDGVIDSIQENPADHTREITVKGKIDTRSYSVPYTASVAVSEG
DYVHRGDKLTLGSIDPKELIQVTDTLTTEKYILAEVQKAYRMQGVDIADKHVEVLTRQML
QKVRVLDPGETDILPGEVMDIGQFRDRNKEVIISGGIPATAQSVILGITKAALETNSFLS
AASFQETTRVLTDASIRGKNDPLLGLKENVIIGKIIPAGTGMPVYRNMEPEADVKKPDSV
YSIGDIEKQMKEKEQSK
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgacgtaaataaatttgaaagtatgcaaattggtcttgcatcacctaacaagatc
agaagctggtcatatggtgaagttaagaagcctgaaaccatcaactaccgtactttaaaa
cctgaaaaagatggtctatttgatgaaagaatctttggaccaactaaagactggtcatgt
gcctgtggtaaatataaaggtgttagataccgcggtatcgtttgtgaccgttgtggtgtt
gaagttacctcttcaaaagtaagaagagaacgtatgggacacattgaattagctgcccct
gtaactcacatttggtacttcaaaggtataccatcaaggatgggcttagtattggacatt
tctccaagattgcttgaagaagttatctactttgctgcatatatcgtaattgatccaggt
gatactgatcttgagcctaagcaattattgaccgaagcagaatatcgtgaacaaaaggct
aaatatggcaaccgttttgaagctaaaatgggtgctgaagctattcgcgaattgcttaaa
aaagttgaccttgacaaagaagttaaggatttgaagaaagaacttcaaactgcaactggt
caaaaacgtacacgtgctatcagacgtttggacattttggatacatttaagaactctggt
aataagcctgaatggatggttatggatgctgttccagttattccaccagatcttcgtcca
atggttcaacttgaaggtggacgtttcgctacatcagatttgaacgatttatacagacgt
gttattaaccgtaataatcgtttgaagagattgcttgatttgaacgctcctaacatcatc
gttcaaaacgaaaagcgtatgcttcaagaagctgttgatgctttaattgataacggtcgt
cgtggtcgtccagttgttggaccaggtaaccgtccacttaagtcactttcacacatgctt
aagggtaagcaaggtcgtttccgtcaaaatttgcttggtaagcgtgttgactactcaggt
cgttcagttatcgatgtttcaccaaaattgaaattctatcaatgtggtgttcctcgtcca
atggctttggaattgtttaagccgtttgtaatgcacgaattggttaaacgtggtattgct
tctaacattaagaatgctaagcgtaagattgatcgtgaagatgatgatatttgggatgta
cttgaagatgtaattaaggagcgtccagttcttttgaaccgtgcacctactcttcaccgt
ttgagtattcaagcatttgagccagttttggtaccaggtaagtcaatcagacttcaccca
ttagcttgtgaagcctacaacgccgacttcgatggtgaccagatggccatccacgtacca
ctttcagacgaagctgttgctgaatctcgtttacttatgcttgctgctcaccacattttg
gctcctaaggatggtaagccaatcgttactccatcacaggatatcgttttgggtaactac
tggttgactcaagctgaacgtggtcgtgaaggtgaagggatgatctttagttcacctgct
gaagctactgtagcttatgaaaatggtgacattcactaccacactatcattggtatgtca
gctgatgctatgcctaagaagccatggccacaaggtcatgaacatggcattttcattact
acatacggtaagcttgtctttaaccaattattcccagatgattacttctacatcaacgaa
ccaactgaagaaaacttaaataatcctttggatgctaagtacttcttgggtgaaggtcaa
gatattcatgacaagattgatgaagttggcgatgatttaatcgctactccatttaagagt
ggtttcttatctgattctattgctactatttacaagtactacaaggttcaacgaacttca
gaatacttggatgatttgaagaagttaggttacactagttcaactacttcaggtattacc
attggtatgaatgatgttccagaaattaaagataaggatgaaaaggtagctaaggcacgt
aaacaagttgatattgtttctaagcaattcagacgtggtttaattactgaacaagaacgt
cacgatcgagtaattagtatttggaacgcatgtaaggacgaaatccaaaacgaaattgct
caaattcactcaccacgtaacccaatttcaatcatggccgactctggtgcccgtggtaac
atttcaaactttactcagttagctggtatgcgtggtttgatggctactcctaacggtggt
ttgttcgaaatccctgttacttcaaacttcaaggaaggtttgtcagtattggaattgttc
atgtcaactcacggtgctcgtaaaggtatgactgatactgctttgaagactgctcagtca
ggttacttgactcgtcgtttagttgatgttgctcaggacgttattattcgtgatgatgat
tgtggtactgatcgtggtattacagttagtgccattatggaaggtgacgaaatgatcgaa
ccattatttgatcgtttggttggtcgtttcactgctgaaacagttaaggatcctaagact
ggtgaagctatcgttggtagagatgttatgatggatgaaaacatggctcataagatctgt
gatgcaggtgtaacccatgttaagattcgttcaattcttacttgtgatactccacacggt
gtatgtcgtaaatgttacggtatgaaccttgctactggtgaagaagttgaagttggtgaa
gcagttggtactgttgccgctcaatcaattggtgaacctggtactcagcttactttgaga
actttccacaacggtggtgttgccggtgccgaagatattactcaaggtttgcctcgtgtg
caagaattgttcgaagcacgtaaccctaagggtcgtgcaaccatttctgaagtagatggt
gtaattgattcaattcaagaaaacccagcagaccatactcgtgaaattactgttaagggt
aagattgatactagaagttacagtgttccttacactgcttctgtggctgtatctgaaggc
gactatgttcaccgtggtgataagttgactcttggttctattgatcctaaggaattgatc
caagttactgatactttgactactgaaaagtacatattggctgaagttcaaaaggcatat
agaatgcagggtgtagacattgcagacaaacacgtcgaagtattgactcgtcaaatgctt
caaaaggtacgtgtccttgatccaggtgaaactgacatcttaccaggtgaagttatggat
atcggtcaatttagagaccgtaacaaggaagttattatttctggtggtatcccagcaact
gcacaaagcgttatcttaggtattactaaggccgctttggaaactaacagtttcttgtca
gctgcttcattccaggaaactactcgtgttcttactgatgcttcaatcagaggtaagaat
gatccacttcttggacttaaggaaaacgttattatcggtaagattattcctgctggtact
ggtatgcctgtataccgcaacatggaacctgaagctgacgttaagaagccagattcagtt
tactcaattggtgatattgaaaagcaaatgaaagaaaaagaacaaagtaagtaa
DBGET
integrated database retrieval system
