Liquorilactobacillus hordei: BSQ49_01675
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Entry
BSQ49_01675 CDS
T06631
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lhw
Liquorilactobacillus hordei
Pathway
lhw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSQ49_01675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhw03021
]
BSQ49_01675
03400 DNA repair and recombination proteins [BR:
lhw03400
]
BSQ49_01675
Enzymes [BR:
lhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSQ49_01675
Transcription machinery [BR:
lhw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSQ49_01675
DNA repair and recombination proteins [BR:
lhw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSQ49_01675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
HHH_5
Ig_GpJ_C
Motif
Other DBs
NCBI-ProteinID:
AUJ29031
UniProt:
A0A3S6QM59
LinkDB
All DBs
Position
366323..367267
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPKIHKIEENLDYGKFVIEPLERGYGTTLGNSLRRILLSSLPGAAITDIQIDGVL
HEFSTIKGVLEDVTQIILNLKKVALRVDSEENQTLEINVAGPLEVTAGDIQGSSDVEVLN
PDLYICTVAEGASFHVRMTANTGRGYVSADDNKARADDMPIGVLPIDSIYTPIERVNYQV
EKARVGQRDDFDKLTLDVWTNGAVTPSEAISLSAKILTEHLTLFVDLTDEAKNAEIMVEK
EETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKSEADMMKVRNLGRKSLEEVK
NKLVDLGLSLRHDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaaaattcataaaatagaagaaaatcttgattatggtaaa
tttgttattgaaccgcttgaacgtggctatggtactactttaggtaattcacttcgtcgt
attttgctttcatcacttcctggtgcagcaattactgatattcaaattgatggtgtattg
catgaattctcaactattaagggtgttcttgaagatgtgacacaaattattttgaatctt
aagaaagttgctttgcgagttgattcagaagaaaaccaaacattggaaatcaatgttgcc
ggtcctcttgaagtaactgcaggtgatattcaaggaagtagtgatgtcgaggttcttaat
cctgatctgtatatctgtacagttgccgaaggagcatcatttcatgttcgaatgactgct
aacactggccgtggttatgtttctgctgatgataacaaagccagggctgatgatatgcca
attggtgtattaccaattgactcaatttataccccaattgaacgtgtaaactatcaagtt
gagaaagcacgtgttggtcaaagagatgattttgataagttgacacttgatgtttggact
aacggtgcagttactccaagtgaagcaatcagcttatctgcgaaaattttaacagagcat
ttgactttatttgttgatcttactgatgaggcaaagaatgctgaaatcatggtagaaaaa
gaagaaacacataaagaaaaaatgcttgagatgacgattgaagagcttgatttatcagtt
cgttcttataattgcttgaaacgtgctggaatcaacacagttcaagaattaactaataag
tctgaagctgatatgatgaaggtccgcaatcttggacgtaagtcattagaagaagttaag
aataaacttgttgacttgggtttatcattacgtcatgatgactaa
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