Liquorilactobacillus hordei: BSQ49_02270
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Entry
BSQ49_02270 CDS
T06631
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lhw
Liquorilactobacillus hordei
Brite
KEGG Orthology (KO) [BR:
lhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhw03400
]
BSQ49_02270
DNA repair and recombination proteins [BR:
lhw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BSQ49_02270
Archaeal homologous recombinant proteins
BSQ49_02270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AUJ29134
UniProt:
A0A3Q8CCD0
LinkDB
All DBs
Position
489375..492497
Genome browser
AA seq
1040 aa
AA seq
DB search
MKPMQIKMTNFGPYAKQEIDFVRFTEQPLFLISGKTGSGKTTIFDAMCFALFGSTSGDDR
EAETMRSGFAKESELTEVEFVFEHQNKIYRIKRQPKQVIVKKRGTGTKIQNMTVLLSYQS
DDGENIELSKVGVVNKFIQELIHLTAEQFTQIIMLPQGKFRNFLDSDSNEKEKLLRELFA
TNLFKNWTDEIQKQAKNTHSQIQEKQQEIDALKNQIMEIDTEIDVSSWLKAANEINGINE
RARNTAKLKLTEIEEKISGEQNNLLKSKILLRDFETLADTKKKMIEFENDNWLEEKEKYL
AELKWYRSNEQLVVKLEEQELAYTEIQAKIQKNLTEKKEVEEKLQNNEEKNQILGIREKE
NELLIEEVRRLNDKKNYVKQAEQLEIELTVTENQEETFKNQITELEKILIVGREEIEKQQ
EIIKSNEGISEKELKFHEIRTNLTKADEVIEQIKRSTARINKLEETVVEQRNSLAEKNSQ
IKIAKKKHEDLDNALAKKQIIILSRKLKKGEPCPLCGSLEHPQIMTLDKNQVEVTEDDVK
KAAKKQQDLSQSSGELAGKIDSNAERITELKKNVDQELEKLRSLLDLREDSFAEIQKLVT
ELKLNLDKEFQNLENRKQIIKYARAEVERLMHEKLEAKEKMELLRKKEQMFKLNITKTET
KLATIHAEIPDNISSMKQLEKIIVDKQQKITAFETEKQKIFSEMTELSNNLTILTERLKG
LKNTSDSLEIKLRQDTEKLTKVMHNHDKNLTFTMMKTGIKEIKKIEMVESKIKDYRNKMF
ELKTQITDLKIRTEGKVIPDIAKLDASLLQLKKNKEEVFAEYEKISQKHSELLKVSQAVN
KRWDEYQAKLKLDAQWNELLEVIGGKGKVKLGLERYVLRRYLEWVLQVANIKLLNLTNER
YHFEIDRNNGTYATNTGLELNIFDADLGKFRSVKTLSGGESFIAALCLALAMAEVIQSIN
GGTQIDALFIDEGFGALDDDSLQVALEALQTLEGKNRLIGIISHVSALREQLPAQIRIES
KNGRSVAHYIFDFEEIPAHR
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgatgcaaataaaaatgactaattttggcccttatgcaaaacaagaaattgat
tttgtacgttttaccgaacagcctctctttttaatcagtggtaagactgggagtgggaaa
acaacaatttttgatgcgatgtgttttgcactttttggaagtacttctggtgatgatcgt
gaggcagagacaatgcgatcaggttttgcaaaggaatctgagttgaccgaggttgaattt
gtttttgaacaccaaaataagatttatcgtattaaaagacaacctaagcaagtcatcgta
aaaaaaaggggaacagggacaaaaattcaaaatatgactgtattgttaagctatcaaagc
gatgatggggagaatatcgaattaagtaaggtaggagttgttaacaagtttattcaagaa
ttaattcatcttactgctgagcaatttacgcagataattatgctgcctcaaggaaaattt
agaaactttttagactcagatagtaatgaaaaggaaaagctgttacgtgaattatttgct
accaatttatttaagaattggacagatgagattcaaaaacaagcaaaaaatacacatagc
cagattcaagaaaaacaacaagaaattgatgcgttaaaaaatcaaattatggaaattgat
acagagattgatgtatctagctggttaaaggctgcaaatgaaataaatgggataaatgag
cgggctagaaatacagctaagttaaaattaaccgaaattgaagagaaaattagcggagaa
caaaataatttattgaaaagtaaaattttattgcgagactttgagacattggctgatact
aagaaaaaaatgattgaatttgaaaatgataattggcttgaagaaaaagagaaatatttg
gctgagttaaagtggtatcgctcaaatgaacaattagttgtgaaacttgaagaacaagaa
ttagcttatacggaaatacaagctaaaattcaaaaaaatttaactgagaaaaaagaggta
gaggaaaaattacagaataacgaagaaaaaaatcaaattttaggaataagggaaaaagag
aatgagctgttaattgaagaggtaagaagattaaatgataagaaaaattatgttaagcaa
gcagaacaattagaaattgaattaacagttactgaaaatcaagaagaaacatttaaaaat
caaataactgaattagagaagatattaatagtaggacgagaggaaattgagaaacaacaa
gaaatcattaaatctaatgaaggaatatctgaaaaagaactaaaattccatgaaataaga
actaacctgactaaggctgacgaagtaatagaacaaataaaaagaagcacagctagaatt
aataaattagaagagactgtagtagagcaaagaaatagtttagctgaaaaaaatagtcaa
atcaaaattgccaaaaaaaagcatgaagatttggataatgcactagcaaaaaaacaaata
attatactaagcagaaagttaaaaaaaggagaaccttgtccattgtgtggttcattagaa
catccacaaataatgacattagataagaatcaagttgaggtaacagaagatgatgtcaaa
aaggcagctaaaaaacaacaagacttgtcgcaaagtagtggtgagttagcagggaaaatt
gatagcaatgcagaaagaattactgaattaaagaaaaatgttgatcaagaactagaaaaa
ttgagaagtcttttggatttgcgagaagatagtttcgcagagattcagaaactggttact
gaattgaagttgaatttagataaggagtttcaaaacttagaaaacagaaaacagattatt
aagtacgctcgagcagaagttgaacgattaatgcatgaaaaactagaagccaaagaaaaa
atggaattactgagaaaaaaagaacaaatgtttaaacttaatattacgaagactgaaaca
aagttggctactattcatgctgaaataccagacaatatttcttctatgaaacagttggag
aaaattatagtagataagcagcaaaaaattacagcttttgaaaccgaaaagcaaaaaatc
tttagtgaaatgactgaacttagtaataacttaacgattcttactgagcgccttaaaggc
ctcaagaatacgagtgactccttagaaatcaagttacggcaagatactgaaaaacttact
aaagttatgcacaatcacgataaaaacttgactttcactatgatgaagacgggaattaag
gaaataaagaagattgaaatggttgaatccaaaattaaagattaccgaaataaaatgttt
gaattaaaaacgcaaattactgatttaaaaataagaacagagggaaaagttattccagat
attgcaaagttagatgcctctcttttacaattaaagaaaaataaggaagaagtttttgca
gaatacgaaaaaatttcacagaagcattctgaactattaaaagtgagtcaggcagttaat
aaaagatgggacgaatatcaagcaaaacttaaattagatgcgcagtggaatgaactgcta
gaagtaattggtggaaagggcaaggtaaaattaggattagaacgatatgtattacgtagg
tacttggagtgggtattgcaagtggctaacattaaattactgaacttgacaaacgagaga
taccactttgaaattgatagaaataatggaacgtatgctacaaatactggacttgagttg
aatatttttgatgctgatttaggtaaatttaggagtgttaaaacactttctggtggtgaa
agtttcattgcggctttgtgtttagcactcgcgatggcagaagttattcagagtattaac
ggaggaacacagattgatgctttatttattgatgaaggttttggagcattagatgatgat
tctttgcaagtagctttagaagcgcttcaaactttagaaggaaaaaatcgtttaattggg
ataattagtcacgtaagtgctctacgtgaacaattaccagctcagattagaatagaatct
aaaaatggtcgcagtgtggcacattatatttttgattttgaagagataccagctcataga
tag
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