KEGG   Liquorilactobacillus hordei: BSQ49_02270
Entry
BSQ49_02270       CDS       T06631                                 
Name
(GenBank) exonuclease
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
lhw  Liquorilactobacillus hordei
Brite
KEGG Orthology (KO) [BR:lhw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lhw03400]
    BSQ49_02270
DNA repair and recombination proteins [BR:lhw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BSQ49_02270
    Archaeal homologous recombinant proteins
     BSQ49_02270
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 SMC_N AAA_21
Other DBs
NCBI-ProteinID: AUJ29134
UniProt: A0A3Q8CCD0
LinkDB
Position
489375..492497
AA seq 1040 aa
MKPMQIKMTNFGPYAKQEIDFVRFTEQPLFLISGKTGSGKTTIFDAMCFALFGSTSGDDR
EAETMRSGFAKESELTEVEFVFEHQNKIYRIKRQPKQVIVKKRGTGTKIQNMTVLLSYQS
DDGENIELSKVGVVNKFIQELIHLTAEQFTQIIMLPQGKFRNFLDSDSNEKEKLLRELFA
TNLFKNWTDEIQKQAKNTHSQIQEKQQEIDALKNQIMEIDTEIDVSSWLKAANEINGINE
RARNTAKLKLTEIEEKISGEQNNLLKSKILLRDFETLADTKKKMIEFENDNWLEEKEKYL
AELKWYRSNEQLVVKLEEQELAYTEIQAKIQKNLTEKKEVEEKLQNNEEKNQILGIREKE
NELLIEEVRRLNDKKNYVKQAEQLEIELTVTENQEETFKNQITELEKILIVGREEIEKQQ
EIIKSNEGISEKELKFHEIRTNLTKADEVIEQIKRSTARINKLEETVVEQRNSLAEKNSQ
IKIAKKKHEDLDNALAKKQIIILSRKLKKGEPCPLCGSLEHPQIMTLDKNQVEVTEDDVK
KAAKKQQDLSQSSGELAGKIDSNAERITELKKNVDQELEKLRSLLDLREDSFAEIQKLVT
ELKLNLDKEFQNLENRKQIIKYARAEVERLMHEKLEAKEKMELLRKKEQMFKLNITKTET
KLATIHAEIPDNISSMKQLEKIIVDKQQKITAFETEKQKIFSEMTELSNNLTILTERLKG
LKNTSDSLEIKLRQDTEKLTKVMHNHDKNLTFTMMKTGIKEIKKIEMVESKIKDYRNKMF
ELKTQITDLKIRTEGKVIPDIAKLDASLLQLKKNKEEVFAEYEKISQKHSELLKVSQAVN
KRWDEYQAKLKLDAQWNELLEVIGGKGKVKLGLERYVLRRYLEWVLQVANIKLLNLTNER
YHFEIDRNNGTYATNTGLELNIFDADLGKFRSVKTLSGGESFIAALCLALAMAEVIQSIN
GGTQIDALFIDEGFGALDDDSLQVALEALQTLEGKNRLIGIISHVSALREQLPAQIRIES
KNGRSVAHYIFDFEEIPAHR
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgaaaccgatgcaaataaaaatgactaattttggcccttatgcaaaacaagaaattgat
tttgtacgttttaccgaacagcctctctttttaatcagtggtaagactgggagtgggaaa
acaacaatttttgatgcgatgtgttttgcactttttggaagtacttctggtgatgatcgt
gaggcagagacaatgcgatcaggttttgcaaaggaatctgagttgaccgaggttgaattt
gtttttgaacaccaaaataagatttatcgtattaaaagacaacctaagcaagtcatcgta
aaaaaaaggggaacagggacaaaaattcaaaatatgactgtattgttaagctatcaaagc
gatgatggggagaatatcgaattaagtaaggtaggagttgttaacaagtttattcaagaa
ttaattcatcttactgctgagcaatttacgcagataattatgctgcctcaaggaaaattt
agaaactttttagactcagatagtaatgaaaaggaaaagctgttacgtgaattatttgct
accaatttatttaagaattggacagatgagattcaaaaacaagcaaaaaatacacatagc
cagattcaagaaaaacaacaagaaattgatgcgttaaaaaatcaaattatggaaattgat
acagagattgatgtatctagctggttaaaggctgcaaatgaaataaatgggataaatgag
cgggctagaaatacagctaagttaaaattaaccgaaattgaagagaaaattagcggagaa
caaaataatttattgaaaagtaaaattttattgcgagactttgagacattggctgatact
aagaaaaaaatgattgaatttgaaaatgataattggcttgaagaaaaagagaaatatttg
gctgagttaaagtggtatcgctcaaatgaacaattagttgtgaaacttgaagaacaagaa
ttagcttatacggaaatacaagctaaaattcaaaaaaatttaactgagaaaaaagaggta
gaggaaaaattacagaataacgaagaaaaaaatcaaattttaggaataagggaaaaagag
aatgagctgttaattgaagaggtaagaagattaaatgataagaaaaattatgttaagcaa
gcagaacaattagaaattgaattaacagttactgaaaatcaagaagaaacatttaaaaat
caaataactgaattagagaagatattaatagtaggacgagaggaaattgagaaacaacaa
gaaatcattaaatctaatgaaggaatatctgaaaaagaactaaaattccatgaaataaga
actaacctgactaaggctgacgaagtaatagaacaaataaaaagaagcacagctagaatt
aataaattagaagagactgtagtagagcaaagaaatagtttagctgaaaaaaatagtcaa
atcaaaattgccaaaaaaaagcatgaagatttggataatgcactagcaaaaaaacaaata
attatactaagcagaaagttaaaaaaaggagaaccttgtccattgtgtggttcattagaa
catccacaaataatgacattagataagaatcaagttgaggtaacagaagatgatgtcaaa
aaggcagctaaaaaacaacaagacttgtcgcaaagtagtggtgagttagcagggaaaatt
gatagcaatgcagaaagaattactgaattaaagaaaaatgttgatcaagaactagaaaaa
ttgagaagtcttttggatttgcgagaagatagtttcgcagagattcagaaactggttact
gaattgaagttgaatttagataaggagtttcaaaacttagaaaacagaaaacagattatt
aagtacgctcgagcagaagttgaacgattaatgcatgaaaaactagaagccaaagaaaaa
atggaattactgagaaaaaaagaacaaatgtttaaacttaatattacgaagactgaaaca
aagttggctactattcatgctgaaataccagacaatatttcttctatgaaacagttggag
aaaattatagtagataagcagcaaaaaattacagcttttgaaaccgaaaagcaaaaaatc
tttagtgaaatgactgaacttagtaataacttaacgattcttactgagcgccttaaaggc
ctcaagaatacgagtgactccttagaaatcaagttacggcaagatactgaaaaacttact
aaagttatgcacaatcacgataaaaacttgactttcactatgatgaagacgggaattaag
gaaataaagaagattgaaatggttgaatccaaaattaaagattaccgaaataaaatgttt
gaattaaaaacgcaaattactgatttaaaaataagaacagagggaaaagttattccagat
attgcaaagttagatgcctctcttttacaattaaagaaaaataaggaagaagtttttgca
gaatacgaaaaaatttcacagaagcattctgaactattaaaagtgagtcaggcagttaat
aaaagatgggacgaatatcaagcaaaacttaaattagatgcgcagtggaatgaactgcta
gaagtaattggtggaaagggcaaggtaaaattaggattagaacgatatgtattacgtagg
tacttggagtgggtattgcaagtggctaacattaaattactgaacttgacaaacgagaga
taccactttgaaattgatagaaataatggaacgtatgctacaaatactggacttgagttg
aatatttttgatgctgatttaggtaaatttaggagtgttaaaacactttctggtggtgaa
agtttcattgcggctttgtgtttagcactcgcgatggcagaagttattcagagtattaac
ggaggaacacagattgatgctttatttattgatgaaggttttggagcattagatgatgat
tctttgcaagtagctttagaagcgcttcaaactttagaaggaaaaaatcgtttaattggg
ataattagtcacgtaagtgctctacgtgaacaattaccagctcagattagaatagaatct
aaaaatggtcgcagtgtggcacattatatttttgattttgaagagataccagctcataga
tag

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