Liquorilactobacillus hordei: BSQ49_03150
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Entry
BSQ49_03150 CDS
T06631
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
lhw
Liquorilactobacillus hordei
Pathway
lhw02020
Two-component system
lhw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lhw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSQ49_03150
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BSQ49_03150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhw03021
]
BSQ49_03150
Transcription machinery [BR:
lhw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSQ49_03150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF6911
HTH_3
HTH_12
MtxA_C
HTH_46
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AUJ29284
UniProt:
A0A3Q8CY87
LinkDB
All DBs
Position
674307..675623
Genome browser
AA seq
438 aa
AA seq
DB search
MPHKQSYGYGQIQKQIQKFALTQQMQQSIQILRYSTEDLAKYLKQKQLDNPFISIKGTMS
YTGKSTDMSNVKIGQFDMVADNKSQSLYDYLLSQVHLTMRKTNLRSWVIYLIGQLDENGY
LKIDLGKLIRKTGVDYITMMDALTLLQQLDPPGVGARSLQECLLLQIQNIEDAPIEAQLI
VENEFVSLVEQNWEKIAANLAIDDKQIENAVEFIQRLTPAPGAAFEQENIGYVYPDLIIK
KISGTTDFSIKTTKKTKPLVVFKKDYYDKFLRENEDEVKKFLKEKQRDFQELIRDIELRA
ETIVRVAEVIIERQHDFFEDGNEQLKPLLLRDVAQKLNLHESTISRAVNGKYLQCDFGVY
ELKYFFRRPVNSIGQDISVDTIKEHINVIIAAESQQKPLSDSKIATKLEKVGIRISRRTV
AKYREELKIGSSTQRKRI
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgccccacaaacaaagttatgggtatggacaaattcaaaaacaaattcaaaaatttgca
ctgacacagcaaatgcagcagtcgattcaaatactacgatatagtactgaagatcttgcg
aagtatttaaaacaaaaacagctggataatccttttatctctattaaggggacaatgagt
tacactggtaaatcgacggatatgtctaatgtcaaaattggtcagtttgatatggttgca
gataacaagagtcaatcgctgtatgattatctgctgtcacaggtgcatttaacgatgagg
aaaacaaatcttaggagttgggttatttatttaattggtcaacttgatgagaatggttac
ctaaaaattgatttagggaaactaattagaaaaactggcgtcgattatattacaatgatg
gatgccttgaccttattgcagcaactcgatccaccgggtgtaggggcacgttccttacaa
gaatgtttacttttgcaaattcaaaatattgaagatgccccaattgaggcacagttaatt
gttgaaaatgagtttgtgagtttggttgaacaaaattgggagaaaattgcagctaatctg
gctatagatgacaaacagattgaaaatgcagttgaatttattcaaaggctgacaccagca
ccaggagcagcttttgaacaagaaaatataggatatgtttaccctgacttaataataaaa
aaaatttcgggaacaactgattttagtatcaaaacgaccaagaagacaaagccactagtt
gtcttcaaaaaagactactatgataagtttttaagagaaaatgaagatgaagtaaaaaaa
tttttgaaagaaaagcaaagagactttcaagaacttatcagagatatcgaattgcgtgca
gagacgattgtgagggtggcagaagttataattgagcggcaacatgatttttttgaggat
ggtaatgagcaattgaagccattgctattaagagatgttgcacaaaaattgaatttgcat
gaatctactattagtcgagcagttaatgggaaatacttacagtgtgattttggagtgtat
gaactaaaatatttcttcaggcgacctgtgaacagtataggacaagatatttctgttgat
acaatcaaagaacatataaatgtaattatagccgctgaaagccagcaaaaacctttgtca
gacagcaaaatagcaacaaaattggaaaaagttggaataagaatatcacggcggaccgtt
gcaaaatatcgtgaagaactaaaaataggtagctcaacacaaagaaaaagaatttaa
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